RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SFMBT1Q9UHJ3 866 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 TMEM200CA6NKL6 621 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 STC2O76061 302 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 RECQL4O94761 1208 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 ATF4P18848 351 aaPredicted RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 ETFBP38117 255 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 PLA2G5P39877 138 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 SEC24CP53992 1094 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 IFRD2Q12894 506 aaPredicted RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 YOD1Q5VVQ6 348 aaPredicted RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 FSTL4Q6MZW2 842 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 SRRM1Q8IYB3 904 aaKnown RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 CMTR2Q8IYT2 770 aaKnown RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 LCORLQ8N3X6 602 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 NKD2Q969F2 451 aaPredicted RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 ARL8AQ96BM9 186 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 SGSM3Q96HU1 749 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 FAM193BQ96PV7 902 aaPredicted RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 ALG13Q9NP73 1137 aaKnown RBP4.27□□□□□ -1.73
XRN1-211ENST00000477237 PRKAG3Q9UGI9 489 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 PCDHA8Q9Y5H6 950 aa4.27□□□□□ -1.73
XRN1-211ENST00000477237 GOLGA6L22H0YM25 854 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 TOX4O94842 621 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 SRGAP2CP0DJJ0 459 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 VSIG10L2P0DP72 767 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 GYPEP15421 78 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 VAMP1P23763 118 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 CRY1Q16526 586 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 MTDHQ86UE4 582 aaKnown RBP4.26□□□□□ -1.73
XRN1-211ENST00000477237 ARHGEF19Q8IW93 802 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 CALML6Q8TD86 181 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 LINC00476Q8WZB0 136 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 SLC46A2Q9BY10 475 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 TGIF2Q9GZN2 237 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 KCNH6Q9H252 994 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 CAPN10Q9HC96 672 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 ST7Q9NRC1 585 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 ASB1Q9Y576 335 aa4.26□□□□□ -1.73
XRN1-211ENST00000477237 SCDO00767 359 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 FOXP2O15409 715 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 GNAT2P19087 354 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 POU3F3P20264 500 aaPredicted RBP4.25□□□□□ -1.73
XRN1-211ENST00000477237 CXCR5P32302 372 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 AVPR1BP47901 424 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 ERCC6LQ2NKX8 1250 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 KRT40Q6A162 431 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 CLEC14AQ86T13 490 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 VPS37DQ86XT2 251 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 NOSTRINQ8IVI9 506 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 PLA2G15Q8NCC3 412 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 CAVIN3Q969G5 261 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 MRRFQ96E11 262 aaKnown RBP4.25□□□□□ -1.73
XRN1-211ENST00000477237 COQ10AQ96MF6 247 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 SLC29A3Q9BZD2 475 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 NCDNQ9UBB6 729 aa4.25□□□□□ -1.73
XRN1-211ENST00000477237 EIF2B4Q9UI10 523 aaKnown RBP4.25□□□□□ -1.73
XRN1-211ENST00000477237 CCDC66A2RUB6 948 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 ARVCFO00192 962 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 RBMXL2O75526 392 aaKnown RBP4.24□□□□□ -1.73
XRN1-211ENST00000477237 ABCG1P45844 678 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 MFAP1P55081 439 aaKnown RBP4.24□□□□□ -1.73
XRN1-211ENST00000477237 LACTBP83111 547 aaPredicted RBP4.24□□□□□ -1.73
XRN1-211ENST00000477237 SPIDRQ14159 915 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 GPR162Q16538 588 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 DPH6Q7L8W6 267 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 C1QL2Q7Z5L3 287 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 APBB1IPQ7Z5R6 666 aaPredicted RBP4.24□□□□□ -1.73
XRN1-211ENST00000477237 LILRA3Q8N6C8 439 aaPredicted RBP4.24□□□□□ -1.73
XRN1-211ENST00000477237 WASF1Q92558 559 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 KCNH7Q9NS40 1196 aa4.24□□□□□ -1.73
XRN1-211ENST00000477237 R3HCC1Q9Y3T6 440 aaKnown RBP4.24□□□□□ -1.73
XRN1-211ENST00000477237 TRAV20A0A0B4J274 112 aa4.23□□□□□ -1.73
XRN1-211ENST00000477237 AQP7O14520 342 aa4.23□□□□□ -1.73
XRN1-211ENST00000477237 JUNP05412 331 aaKnown RBP4.23□□□□□ -1.73
XRN1-211ENST00000477237 DNM2P50570 870 aa4.23□□□□□ -1.73
XRN1-211ENST00000477237 ALDH6A1Q02252 535 aaKnown RBP4.23□□□□□ -1.73
XRN1-211ENST00000477237 FAM214AQ32MH5 1076 aa4.23□□□□□ -1.73
XRN1-211ENST00000477237 CMTM4Q8IZR5 234 aa4.23□□□□□ -1.73
XRN1-211ENST00000477237 OR5AN1Q8NGI8 311 aa4.23□□□□□ -1.73
XRN1-211ENST00000477237 ERCC4Q92889 916 aaPredicted RBP4.23□□□□□ -1.73
XRN1-211ENST00000477237 DKK2Q9UBU2 259 aa4.23□□□□□ -1.73
XRN1-211ENST00000477237 NCR1O76036 304 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 RASGRP1O95267 797 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 MATN4O95460 622 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 IGLV2-14P01704 120 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 HKR1P10072 659 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 SDHAP31040 664 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 APOBEC3AP31941 199 aaPredicted RBP4.22□□□□□ -1.73
XRN1-211ENST00000477237 NPEPPSP55786 919 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 GUCY1A3Q02108 690 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 CATSPEREQ5SY80 951 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 RTN4RL1Q86UN2 441 aaPredicted RBP4.22□□□□□ -1.73
XRN1-211ENST00000477237 FOXRED1Q96CU9 486 aaPredicted RBP4.22□□□□□ -1.73
XRN1-211ENST00000477237 ZNF778Q96MU6 729 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.22□□□□□ -1.73
XRN1-211ENST00000477237 C1QTNF7Q9BXJ2 289 aa4.22□□□□□ -1.73
XRN1-211ENST00000477237 AKIP1Q9NQ31 210 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms