RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 RREB1Q92766 1687 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 FAM187AA6NFU0 413 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 SIGLEC16A6NMB1 481 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 RASGRF2O14827 1237 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ATP5HO75947 161 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 PDE8BO95263 885 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 DR1Q01658 176 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 PPP2R5EQ16537 467 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 TXNRD1Q16881 649 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 SPTY2D1Q68D10 685 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 CGB2Q6NT52 195 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 NT5DC3Q86UY8 548 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ECHDC2Q86YB7 292 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ZBTB8BQ8NAP8 495 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 FBXO25Q8TCJ0 367 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 UCMAQ8WVF2 138 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 CKAP2Q8WWK9 683 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ZNF333Q96JL9 665 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 DMAP1Q9NPF5 467 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 CTTNBP2NLQ9P2B4 639 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 KLHL14Q9P2G3 628 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 SCOCQ9UIL1 159 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 PCDHA4Q9UN74 947 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 DAAM1Q9Y4D1 1078 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 KIAA0391O15091 583 aaKnown RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 SLCO1A2P46721 670 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 PLTPP55058 493 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 MECOMQ03112 1051 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 PTK2Q05397 1052 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 RNASELQ05823 741 aaKnown RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 WASHC2DQ5SRD0 308 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 NANOGNBQ7Z5D8 188 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 CFAP61Q8NHU2 1237 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 RASGRP4Q8TDF6 673 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 IWS1Q96ST2 819 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 TCP11L1Q9NUJ3 509 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 LRCH1Q9Y2L9 728 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 DUOX1Q9NRD9 1551 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 PVALEFA0A1B0GWK0 134 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 LSM1O15116 133 aaKnown RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 TMCC1O94876 653 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 PENKP01210 267 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 FGGP02679 453 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 P3H1Q32P28 736 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 KIAA1755Q5JYT7 1200 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 VSTM1Q6UX27 236 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 UNC13DQ70J99 1090 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 ZNF571Q7Z3V5 609 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 PROM2Q8N271 834 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 OGFOD1Q8N543 542 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 SUPT20HQ8NEM7 779 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 INPP5DQ92835 1189 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 AZIN2Q96A70 460 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 CCDC113Q9H0I3 377 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 GANQ9H2C0 597 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■■■□ 22.1
ABCF1-205ENST00000475993 GRHL1Q9NZI5 618 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 NAGPAQ9UK23 515 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 DBR1Q9UK59 544 aaKnown RBP11.37□□□□□ -0.59
ABCF1-205ENST00000475993 TMCO1Q9UM00 188 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 PLCH1Q4KWH8 1693 aa11.37□□□□□ -0.59
ABCF1-205ENST00000475993 ATAD5Q96QE3 1844 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 A0A0A6YYK5 440 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 TMEM120BA0PK00 339 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 MINDY4BA8MYZ0 360 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 HNRNPRO43390 633 aaKnown RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 NCCRP1Q6ZVX7 275 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 IRF2BP2Q7Z5L9 587 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 SYCE1Q8N0S2 351 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 NAP1L3Q99457 506 aaPredicted RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 DDX23Q9BUQ8 820 aaKnown RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 TIPINQ9BVW5 301 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 FAM192AQ9GZU8 254 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 SH3GLB2Q9NR46 395 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 NENFQ9UMX5 172 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 RPL26L1Q9UNX3 145 aaKnown RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 COL4A3BPQ9Y5P4 624 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 CCDC194A0A1B0GVG4 234 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 RIPK2O43353 540 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 KRT38O76015 456 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 EYA4O95677 639 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 HNRNPCP07910 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 RASA1P20936 1047 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 GSTT1P30711 240 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 NPEPPSP55786 919 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 DHX34Q14147 1143 aaKnown RBP11.36□□□□□ -0.59
ABCF1-205ENST00000475993 MUM1Q2TAK8 710 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 SLC4A8Q2Y0W8 1093 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 MGARPQ8TDB4 240 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 TRIM11Q96F44 468 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 FAM89AQ96GI7 184 aa11.36□□□□□ -0.59
ABCF1-205ENST00000475993 PPP1R12CQ9BZL4 782 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms