RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 INTUQ9ULD6 942 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 COL4A3BPQ9Y5P4 624 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 BAZ2BQ9UIF8 2168 aaKnown RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 COL2A1P02458 1487 aaPredicted RBP7.51□□□□□ -1.21
UBR4-212ENST00000475973 GTPBP10A4D1E9 387 aaKnown RBP7.51□□□□□ -1.21
UBR4-212ENST00000475973 PDHXO00330 501 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 SLC37A4O43826 429 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 CCNT1O60563 726 aaKnown RBP7.51□□□□□ -1.21
UBR4-212ENST00000475973 CTNND1O60716 968 aaKnown RBP7.51□□□□□ -1.21
UBR4-212ENST00000475973 TSPY3P0CV98 308 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 TSPY8P0CW00 308 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 HOXD10P28358 340 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 TECP42680 631 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 SLC1A4P43007 532 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 USP11P51784 963 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 NAPAP54920 295 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 JAM2P57087 298 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 LACTBP83111 547 aaPredicted RBP7.51□□□□□ -1.21
UBR4-212ENST00000475973 SPIRE1Q08AE8 756 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 LETM2Q2VYF4 491 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 CFAP221Q4G0U5 840 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 ICE2Q659A1 982 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 CCDC70Q6NSX1 233 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 NFRKBQ6P4R8 1299 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 FASTKD5Q7L8L6 764 aaKnown RBP7.51□□□□□ -1.21
UBR4-212ENST00000475973 HEATR3Q7Z4Q2 680 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 IFT20Q8IY31 132 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 TEX11Q8IYF3 940 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 C10orf67Q8IYJ2 551 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 MYOCDQ8IZQ8 938 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 USP38Q8NB14 1042 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 EPS8L1Q8TE68 723 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 MKL1Q969V6 931 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 RRP36Q96EU6 259 aaKnown RBP7.51□□□□□ -1.21
UBR4-212ENST00000475973 ZIM3Q96PE6 472 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 ALS2CR12Q96Q35 445 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 PIGSQ96S52 555 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 CEP89Q96ST8 783 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 CRACR2AQ9BSW2 395 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 PRR14Q9BWN1 585 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 CAPS2Q9BXY5 557 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 ISCUQ9H1K1 167 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 MKNK2Q9HBH9 465 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 MTMR4Q9NYA4 1195 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 RSPH14Q9UHP6 348 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 SLC12A6Q9UHW9 1150 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 DAAM1Q9Y4D1 1078 aa7.51□□□□□ -1.21
UBR4-212ENST00000475973 A0A0G2JLL6 359 aaPredicted RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 PNMA6FA0A0J9YX94 578 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 MACROD2A1Z1Q3 448 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 TBX3O15119 743 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 PPP1R11O60927 126 aaPredicted RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 PHACTR2O75167 634 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 PTPRAP18433 802 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 CYP11B2P19099 503 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 KLRC1P26715 233 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 PAFAH1B1P43034 410 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 CARSP49589 748 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 SLC12A3P55017 1021 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 HADHBP55084 474 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 GSCP56915 257 aaPredicted RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 ZNF543Q08ER8 600 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 COASYQ13057 564 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 ITGB3BPQ13352 177 aaPredicted RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 CALCRLQ16602 461 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 SLC4A8Q2Y0W8 1093 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 ARSHQ5FYA8 562 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 RRAGAQ7L523 313 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 FRMD5Q7Z6J6 570 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 PRRT2Q7Z6L0 340 aaPredicted RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 GSPT2Q8IYD1 628 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 CNPY4Q8N129 248 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 PRPF38AQ8NAV1 312 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 SLC44A5Q8NCS7 719 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 GLIS3Q8NEA6 775 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 SLC30A5Q8TAD4 765 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 SCFD1Q8WVM8 642 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 CASKIN2Q8WXE0 1202 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 HPS3Q969F9 1004 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 CEP95Q96GE4 821 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 PBKQ96KB5 322 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 CAPZA3Q96KX2 299 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 RAB34Q9BZG1 259 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 DHX36Q9H2U1 1008 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 JMJD4Q9H9V9 463 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.5□□□□□ -1.21
UBR4-212ENST00000475973 TMBIM4Q9HC24 238 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 SLC39A2Q9NP94 309 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 SIX2Q9NPC8 291 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 JADE2Q9NQC1 790 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 DDX4Q9NQI0 724 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 SLC45A1Q9Y2W3 748 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 PTCH2Q9Y6C5 1203 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 BZW2Q9Y6E2 419 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 FAM169AQ9Y6X4 670 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 ZHX2Q9Y6X8 837 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 KDM3AQ9Y4C1 1321 aa7.5□□□□□ -1.21
UBR4-212ENST00000475973 POLR2AP24928 1970 aaKnown RBP7.5□□□□□ -1.21
UBR4-212ENST00000475973 OTOFQ9HC10 1997 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms