RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SUPT20HL2P0C7V6 817 aa16.77■□□□□ 0.28
RPUSD3-215ENST00000475470 NPTX2P47972 431 aa16.77■□□□□ 0.28
RPUSD3-215ENST00000475470 CHMP4BP1P59074 171 aa16.77■□□□□ 0.28
RPUSD3-215ENST00000475470 SNRPFP62306 86 aaKnown RBP16.77■□□□□ 0.28
RPUSD3-215ENST00000475470 WHAMMP3Q1A5X7 153 aa16.77■□□□□ 0.28
RPUSD3-215ENST00000475470 FBXO38Q6PIJ6 1188 aa16.77■□□□□ 0.28
RPUSD3-215ENST00000475470 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
RPUSD3-215ENST00000475470 TACC1O75410 805 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 DGAT1O75907 488 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 AMPD2Q01433 879 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 PPIL2Q13356 520 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 XXYLT1Q8NBI6 393 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 TMEM174Q8WUU8 243 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 C17orf75Q9HAS0 396 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 KMT5AQ9NQR1 393 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 KCNH4Q9UQ05 1017 aa16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 BZW2Q9Y6E2 419 aaKnown RBP16.77■□□□□ 0.27
RPUSD3-215ENST00000475470 ATP1A1P05023 1023 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 SLC18A3Q16572 532 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 CBWD6Q4V339 395 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 EAPPQ56P03 285 aaPredicted RBP16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 CBWD3Q5JTY5 395 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 CBWD5Q5RIA9 395 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 IRF2BP2Q7Z5L9 587 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 TMEM161BQ8NDZ6 487 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 MCPH1Q8NEM0 835 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 TRIM58Q8NG06 486 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 OPTNQ96CV9 577 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 CYP26B1Q9NR63 512 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 HSPBP1Q9NZL4 362 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 TBX20Q9UMR3 447 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 SOWAHBA6NEL2 793 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 PJA2O43164 708 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 SOX10P56693 466 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 MYL7Q01449 175 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 XKR3Q5GH77 459 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 HVCN1Q96D96 273 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 KIFC3Q9BVG8 833 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 MLXIPQ9HAP2 919 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 HDAC6Q9UBN7 1215 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 ADAMTS1Q9UHI8 967 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 SAR1BQ9Y6B6 198 aa16.76■□□□□ 0.27
RPUSD3-215ENST00000475470 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 SLC25A27O95847 323 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 PAPD7Q5XG87 772 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 IQCEQ6IPM2 695 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 GJB7Q6PEY0 223 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 GPR161Q8N6U8 529 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 SPIRE2Q8WWL2 714 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 RABGGTAQ92696 567 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 NTPCRQ9BSD7 190 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 ATP6V0A4Q9HBG4 840 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 ZNF302Q9NR11 478 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 IGSF9BQ9UPX0 1349 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 A0A087X0T9 212 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 DENND3A2RUS2 1198 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 CNMDO75829 334 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 MOCS3O95396 460 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 FAM228BP0C875 321 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 H2AFXP16104 143 aaPredicted RBP16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 OSBPP22059 807 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 VAMP7P51809 220 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 JAM2P57087 298 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 PTK2Q05397 1052 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 MTERF2Q49AM1 385 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 FASTKD5Q7L8L6 764 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 ANKRD13CQ8N6S4 541 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 BSNDQ8WZ55 320 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 ALS2CR12Q96Q35 445 aa16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 AJAP1Q9UKB5 411 aaPredicted RBP16.75■□□□□ 0.27
RPUSD3-215ENST00000475470 CTAGE15A4D2H0 777 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 ATG7O95352 703 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 CTAGE8P0CG41 777 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 EDNRBP24530 442 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 CTAGE6Q86UF2 777 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 CTAGE4Q8IX94 777 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 INTS2Q9H0H0 1204 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 PDLIM7Q9NR12 457 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 ARGLU1Q9NWB6 273 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 CAPN6Q9Y6Q1 641 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 SYNGAP1Q96PV0 1343 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 STAT1P42224 750 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 NAP1L1P55209 391 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 DLG4P78352 724 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 CETN1Q12798 172 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 ZNF571Q7Z3V5 609 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 MAP4K3Q8IVH8 894 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 JRKLQ9Y4A0 524 aa16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 MAFBQ9Y5Q3 323 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-215ENST00000475470 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms