RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 TMC5Q6UXY8 1006 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 SYNE3Q6ZMZ3 975 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 TMEM173Q86WV6 379 aaPredicted RBP18■□□□□ 0.47
ITGB1-211ENST00000475184 CCDC105Q8IYK2 499 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 ZNF668Q96K58 619 aaPredicted RBP18■□□□□ 0.47
ITGB1-211ENST00000475184 SCLT1Q96NL6 688 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 DACT1Q9NYF0 836 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 GABBR1Q9UBS5 961 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 PCDHA10Q9Y5I2 948 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 EPG5Q9HCE0 2579 aa18■□□□□ 0.47
ITGB1-211ENST00000475184 PI15O43692 258 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 ZC3H11AO75152 810 aaKnown RBP eCLIP17.99■□□□□ 0.47
ITGB1-211ENST00000475184 CYP3A4P08684 503 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 CTSAP10619 480 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 GPC3P51654 580 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 POLGP54098 1239 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-211ENST00000475184 SETQ01105 290 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-211ENST00000475184 GIT2Q14161 759 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 JAKMIP3Q5VZ66 844 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 CABP7Q86V35 215 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 SLC22A17Q8WUG5 538 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 CRYGNQ8WXF5 182 aa17.99■□□□□ 0.47
ITGB1-211ENST00000475184 ACSF2Q96CM8 615 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-211ENST00000475184 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-211ENST00000475184 CACNA1IQ9P0X4 2223 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 CARNS1A5YM72 827 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 NPR3P17342 541 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 FGFR4P22455 802 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 TDGQ13569 410 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 ANGPT1Q15389 498 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 RTN1Q16799 776 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 CCDC149Q6ZUS6 474 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 OTOP3Q7RTS5 596 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 DDX53Q86TM3 631 aaKnown RBP17.98■□□□□ 0.47
ITGB1-211ENST00000475184 FEZF2Q8TBJ5 459 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 RSPH1Q8WYR4 309 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 RTP3Q9BQQ7 232 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 LSG1Q9H089 658 aaKnown RBP17.98■□□□□ 0.47
ITGB1-211ENST00000475184 SFXN1Q9H9B4 322 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 SAMM50Q9Y512 469 aa17.98■□□□□ 0.47
ITGB1-211ENST00000475184 SPTBN2O15020 2390 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 OATP04181 439 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 CREB3L3Q68CJ9 461 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 GPR149Q86SP6 731 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 PPFIBP1Q86W92 1011 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 DTWD2Q8NBA8 298 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 NLRP7Q8WX94 980 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 IGSF21Q96ID5 467 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 FBXL21Q9UKT6 434 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 DUSP12Q9UNI6 340 aa17.97■□□□□ 0.47
ITGB1-211ENST00000475184 MTCL1Q9Y4B5 1905 aaKnown RBP17.96■□□□□ 0.47
ITGB1-211ENST00000475184 SPDYE4A6NLX3 237 aa17.96■□□□□ 0.47
ITGB1-211ENST00000475184 WDR64B1ANS9 1081 aa17.96■□□□□ 0.47
ITGB1-211ENST00000475184 ZNF862O60290 1169 aa17.96■□□□□ 0.47
ITGB1-211ENST00000475184 CSDE1O75534 798 aaKnown RBP17.96■□□□□ 0.47
ITGB1-211ENST00000475184 PHKA2P46019 1235 aa17.96■□□□□ 0.47
ITGB1-211ENST00000475184 PRKCEQ02156 737 aa17.96■□□□□ 0.47
ITGB1-211ENST00000475184 SIX5Q8N196 739 aa17.96■□□□□ 0.47
ITGB1-211ENST00000475184 BCL7CQ8WUZ0 217 aaPredicted RBP17.96■□□□□ 0.47
ITGB1-211ENST00000475184 ZBTB43O43298 467 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 TBC1D8BQ0IIM8 1120 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 PRR16Q569H4 304 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 GLB1LQ6UWU2 654 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 LPPQ93052 612 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 TRAIPQ9BWF2 469 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 KCNK12Q9HB15 430 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 CHST12Q9NRB3 414 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 NRBP2Q9NSY0 501 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 TBC1D13Q9NVG8 400 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 BRPF3Q9ULD4 1205 aa17.95■□□□□ 0.46
ITGB1-211ENST00000475184 GALTP07902 379 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 RNASELQ05823 741 aaKnown RBP17.94■□□□□ 0.46
ITGB1-211ENST00000475184 LONRF3Q496Y0 759 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 NOMO2Q5JPE7 1267 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 TWF2Q6IBS0 349 aaKnown RBP17.94■□□□□ 0.46
ITGB1-211ENST00000475184 REXO1Q8N1G1 1221 aaKnown RBP17.94■□□□□ 0.46
ITGB1-211ENST00000475184 VN1R3Q9BXE9 311 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 GCOM2Q9BZD3 368 aaPredicted RBP17.94■□□□□ 0.46
ITGB1-211ENST00000475184 NRDE2Q9H7Z3 1164 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 DISC1Q9NRI5 854 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 INPP5FQ9Y2H2 1132 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 GPR179Q6PRD1 2367 aa17.94■□□□□ 0.46
ITGB1-211ENST00000475184 ESYT2A0FGR8 921 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 GOLGA8AA7E2F4 631 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 GOLGA8BA8MQT2 603 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 ADAMTS3O15072 1205 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 SKIP12755 728 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 CLCN4P51793 760 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 DRP2Q13474 957 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 LETM2Q2VYF4 491 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 C15orf39Q6ZRI6 1047 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 KCNG4Q8TDN1 519 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 LENG9Q96B70 501 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 EMILIN2Q9BXX0 1053 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 IGSF9Q9P2J2 1179 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 DNAJB4Q9UDY4 337 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 MIA3Q5JRA6 1907 aa17.93■□□□□ 0.46
ITGB1-211ENST00000475184 DOCK6Q96HP0 2047 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms