RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 FAM205CA6NFA0 338 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 H3BQV1 296 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 ALADP13716 330 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 GJB2P29033 226 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 GTF2F1P35269 517 aaKnown RBP eCLIP16.91■□□□□ 0.3
VARS-223ENST00000474643 PPM1AP35813 382 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 SMAD4Q13485 552 aaKnown RBP16.91■□□□□ 0.3
VARS-223ENST00000474643 BMS1Q14692 1282 aaKnown RBP16.91■□□□□ 0.3
VARS-223ENST00000474643 PLA2G4FQ68DD2 849 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 PPP4R3AQ6IN85 833 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 CATSPER4Q7RTX7 472 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 CEP170P1Q96L14 293 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 MBOAT7Q96N66 472 aa16.91■□□□□ 0.3
VARS-223ENST00000474643 MRPL9Q9BYD2 267 aaKnown RBP16.91■□□□□ 0.3
VARS-223ENST00000474643 FAM86C2PA6NEL3 165 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 LINC01565O15544 149 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 EDIL3O43854 480 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 CSDE1O75534 798 aaKnown RBP16.9■□□□□ 0.3
VARS-223ENST00000474643 P4HBP07237 508 aaKnown RBP16.9■□□□□ 0.3
VARS-223ENST00000474643 SKIP12755 728 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 DNAJB1P25685 340 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 IRS1P35568 1242 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 PPP2R5CQ13362 524 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 DSC3Q14574 896 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 EARS2Q5JPH6 523 aaKnown RBP16.9■□□□□ 0.3
VARS-223ENST00000474643 PLPP4Q5VZY2 271 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 PDE12Q6L8Q7 609 aaKnown RBP16.9■□□□□ 0.3
VARS-223ENST00000474643 OTUD6AQ7L8S5 288 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 ZNF410Q86VK4 478 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 ECHDC2Q86YB7 292 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 LINC01465Q8N7H1 131 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 CYP26B1Q9NR63 512 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 KIAA1671Q9BY89 1806 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 WDR81Q562E7 1941 aa16.9■□□□□ 0.3
VARS-223ENST00000474643 A0A087WZ62 844 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 TBX3O15119 743 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 TBX10O75333 385 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 MAFO75444 373 aaPredicted RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 FAM189BP81408 668 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 RNASELQ05823 741 aaKnown RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 DLX2Q07687 328 aaPredicted RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 DRP2Q13474 957 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 COL19A1Q14993 1142 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 TARBP2Q15633 366 aaKnown RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 CTC1Q2NKJ3 1217 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 ADGRD2Q7Z7M1 963 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 ADHFE1Q8IWW8 467 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 EFHBQ8N7U6 833 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 HELQQ8TDG4 1101 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 PSPC1Q8WXF1 523 aaKnown RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 TNFRSF25Q93038 417 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 SNX21Q969T3 373 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 TCF25Q9BQ70 676 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 FDXACB1Q9BRP7 624 aaPredicted RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 LXNQ9BS40 222 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 FOXP1Q9H334 677 aaPredicted RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 KCNMB3Q9NPA1 279 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 CHST12Q9NRB3 414 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 BMP2KQ9NSY1 1161 aaPredicted RBP16.89■□□□□ 0.29
VARS-223ENST00000474643 HCSTQ9UBK5 93 aa16.89■□□□□ 0.29
VARS-223ENST00000474643 A0A0U1RQF3 1178 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 MBTPS2O43462 519 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 EOMESO95936 686 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 LTBRP36941 435 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 ALDH7A1P49419 539 aaKnown RBP16.88■□□□□ 0.29
VARS-223ENST00000474643 CYP4A11Q02928 519 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 ADAM15Q13444 863 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 CAMK1Q14012 370 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 SMAD2Q15796 467 aaKnown RBP16.88■□□□□ 0.29
VARS-223ENST00000474643 CALCRLQ16602 461 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 KCNT2Q6UVM3 1135 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 GLB1LQ6UWU2 654 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 ANO5Q75V66 913 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 TCP11Q8WWU5 503 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 CASD1Q96PB1 797 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 CDCA3Q99618 268 aaPredicted RBP16.88■□□□□ 0.29
VARS-223ENST00000474643 CD320Q9NPF0 282 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 SPG21Q9NZD8 308 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 VAV3Q9UKW4 847 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
VARS-223ENST00000474643 PPME1Q9Y570 386 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 COL4A3BPQ9Y5P4 624 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 MYO7AQ13402 2215 aa16.88■□□□□ 0.29
VARS-223ENST00000474643 FNDC1Q4ZHG4 1894 aaPredicted RBP16.87■□□□□ 0.29
VARS-223ENST00000474643 PI4K2BG5E9Z4 385 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 K7ELQ4 463 aaPredicted RBP16.87■□□□□ 0.29
VARS-223ENST00000474643 EML1O00423 815 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 PER2O15055 1255 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 DCXO43602 365 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 SRGAP2CP0DJJ0 459 aa16.87■□□□□ 0.29
VARS-223ENST00000474643 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
VARS-223ENST00000474643 RFC5P40937 340 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms