RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PLA2G4FQ68DD2 849 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 CC2D1AQ6P1N0 951 aaPredicted RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 TMCO3Q6UWJ1 677 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 OTUD6AQ7L8S5 288 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 PRRT2Q7Z6L0 340 aaPredicted RBP10.71□□□□□ -0.69
USP39-214ENST00000474572 FMNL3Q8IVF7 1028 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 TMEM161BQ8NDZ6 487 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 LMO3Q8TAP4 145 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 KIFAP3Q92845 792 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 VTI1AQ96AJ9 217 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 ALS2CR12Q96Q35 445 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 SPAG5Q96R06 1193 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 PARD6BQ9BYG5 372 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 STK33Q9BYT3 514 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 GPR88Q9GZN0 384 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 EPC1Q9H2F5 836 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 SPON1Q9HCB6 807 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 HDAC6Q9UBN7 1215 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 SLC9A2Q9UBY0 812 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 FBXO40Q9UH90 709 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 INTUQ9ULD6 942 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 PCDHGC5Q9Y5F6 944 aa10.71□□□□□ -0.69
USP39-214ENST00000474572 SCN4AP35499 1836 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 IGKV6D-21A0A0A0MT36 114 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 TMEM150BA6NC51 233 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 F8VZ95 297 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 CXCL11O14625 94 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 EXOC3O60645 756 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 DGAT1O75907 488 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 SUPT20HL2P0C7V6 817 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 TCP1P17987 556 aaKnown RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 ABCD1P33897 745 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 STAT1P42224 750 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 CYP2J2P51589 502 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 ALDH5A1P51649 535 aaPredicted RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 NPEPPSP55786 919 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 ACTR2P61160 394 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 MYL7Q01449 175 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 PTK2Q05397 1052 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 PPATQ06203 517 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 EPC2Q52LR7 807 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 TREML2Q5T2D2 321 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 WDR93Q6P2C0 686 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 CREG2Q8IUH2 290 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 CCDC60Q8IWA6 550 aaPredicted RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 SYCP3Q8IZU3 236 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 MSL3Q8N5Y2 521 aaKnown RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 XXYLT1Q8NBI6 393 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 DCPSQ96C86 337 aaKnown RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 L3MBTL3Q96JM7 780 aaPredicted RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 NOX5Q96PH1 765 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 INTS2Q9H0H0 1204 aaKnown RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 JPH1Q9HDC5 661 aaPredicted RBP10.7□□□□□ -0.7
USP39-214ENST00000474572 GPRC5CQ9NQ84 441 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 XPNPEP1Q9NQW7 623 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 HSPBP1Q9NZL4 362 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 BTBD7Q9P203 1132 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 GABBR1Q9UBS5 961 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 APEX2Q9UBZ4 518 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 TSKSQ9UJT2 592 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 EXOC7Q9UPT5 735 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 KCNH4Q9UQ05 1017 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 HYOU1Q9Y4L1 999 aa10.7□□□□□ -0.7
USP39-214ENST00000474572 SYNGAP1Q96PV0 1343 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 A0A0A6YYK5 440 aaPredicted RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 SPDYE5A6NIY4 337 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 ADM5C9JUS6 153 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 EIF3JO75822 258 aaKnown RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 CNMDO75829 334 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 TRIM49P0CI25 452 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 TRIM49CP0CI26 452 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 PNMA6AP0CW24 399 aaPredicted RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 KRT13P13646 458 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 SCP2P22307 547 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 KLRC1P26715 233 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 SOX5P35711 763 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 NPTX2P47972 431 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 IREB2P48200 963 aaKnown RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 VAMP7P51809 220 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 PEX3P56589 373 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 STXBP2Q15833 593 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 XKR3Q5GH77 459 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 UTP14CQ5TAP6 766 aaKnown RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 MIS18BP1Q6P0N0 1132 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 GJB7Q6PEY0 223 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 MAEAQ7L5Y9 396 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 ERO1BQ86YB8 467 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 SULF1Q8IWU6 871 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 NOA1Q8NC60 698 aaKnown RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 MCPH1Q8NEM0 835 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 SLC30A5Q8TAD4 765 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 PLEKHO2Q8TD55 490 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 FBXL18Q96ME1 805 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 CCDC43Q96MW1 224 aaKnown RBP10.69□□□□□ -0.7
USP39-214ENST00000474572 CEP89Q96ST8 783 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 PNKPQ96T60 521 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 MMS19Q96T76 1030 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 CBWD1Q9BRT8 395 aa10.69□□□□□ -0.7
USP39-214ENST00000474572 TLR10Q9BXR5 811 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms