RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OSBPL9Q96SU4 736 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 MPHOSPH8Q99549 860 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 FSD1Q9BTV5 496 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 ANLNQ9NQW6 1124 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 FARSBQ9NSD9 589 aaKnown RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 ANO10Q9NW15 660 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 GALNT8Q9NY28 637 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 EHD2Q9NZN4 543 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 ITIH6Q6UXX5 1313 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 E7EVH7 732 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 USO1O60763 962 aaKnown RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 SMPD2O60906 423 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 PIAS2O75928 621 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 EYA4O95677 639 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 ITGB1P05556 798 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 GLAP06280 429 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 ASGR1P07306 291 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 PDHA1P08559 390 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 MZF1P28698 734 aaPredicted RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 L1CAMP32004 1257 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 PTGS2P35354 604 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 CASP7P55210 303 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 TRAP1Q12931 704 aaKnown RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 STK38Q15208 465 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 CCDC149Q6ZUS6 474 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 BRINP3Q76B58 766 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 UPF1Q92900 1129 aaKnown RBP eCLIP3.78□□□□□ -1.8
UBR3-208ENST00000474426 ATP6V1G3Q96LB4 118 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 PRPF18Q99633 342 aaKnown RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 EIF2AQ9BY44 585 aaKnown RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 AGXT2Q9BYV1 514 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 UBE2OQ9C0C9 1292 aaKnown RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 RHBGQ9H310 441 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 OSGEPQ9NPF4 335 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 ARGLU1Q9NWB6 273 aaPredicted RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 IL37Q9NZH6 218 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 EGFL7Q9UHF1 273 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 TTC7AQ9ULT0 858 aaPredicted RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 C19orf53Q9UNZ5 99 aaPredicted RBP3.78□□□□□ -1.8
UBR3-208ENST00000474426 EXOC6BQ9Y2D4 811 aa3.78□□□□□ -1.8
UBR3-208ENST00000474426 FRMD3A2A2Y4 597 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L15C9J2P7 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L10C9JJH3 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L13C9JLJ4 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L12C9JPN9 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L11C9JVI0 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L21D6R901 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L18D6R9N7 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L22D6RA61 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L17D6RBQ6 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L19D6RCP7 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L20D6RJB6 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 TNFRSF10AO00220 468 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 IRS4O14654 1257 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 TLR3O15455 904 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 TLR5O60602 858 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 MAFO75444 373 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 SEC31AO94979 1220 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 IGHA2P01877 340 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ADRB2P07550 413 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RHOXF2BP0C7M4 288 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 EEF2P13639 858 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 MLH1P40692 756 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ABCG1P45844 678 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 IFNAR2P48551 515 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 CCT5P48643 541 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 HNMTP50135 292 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L24Q0WX57 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 DHX34Q14147 1143 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 PSMD6Q15008 389 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ANO4Q32M45 955 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 CEP128Q6ZU80 1094 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 LRRC34Q8IZ02 419 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 OR6P1Q8NGX9 317 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RFWD2Q8NHY2 731 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 SLC7A3Q8WY07 619 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 SEPT1Q8WYJ6 367 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 RHOXF2Q9BQY4 288 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 TSEN34Q9BSV6 310 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 CARD14Q9BXL6 1004 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 GHITMQ9H3K2 345 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 IARS2Q9NSE4 1012 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 PCOLCE2Q9UKZ9 415 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 ASB3Q9Y575 518 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 DNMT3AQ9Y6K1 912 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 INSRP06213 1382 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 A0A1B0GWJ7 208 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PSMD14O00487 310 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 TRDMT1O14717 391 aaKnown RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 IRAK2O43187 625 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 CLN5O75503 358 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 MICAL2O94851 1124 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 TRIM16O95361 564 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 TBX18O95935 607 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PENKP01210 267 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 USP17L8P0C7I0 530 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 GNAT1P11488 350 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 PPARGP37231 505 aaPredicted RBP3.77□□□□□ -1.81
UBR3-208ENST00000474426 NRLP54845 237 aa3.77□□□□□ -1.81
UBR3-208ENST00000474426 EIF4A1P60842 406 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms