RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 DGKDQ16760 1214 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 GJC2Q5T442 439 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 ESRP1Q6NXG1 681 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 WDR66Q8TBY9 1149 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 PAWRQ96IZ0 340 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 PTPN18Q99952 460 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 ZDHHC5Q9C0B5 715 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 JADE2Q9NQC1 790 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 ATP8A1Q9Y2Q0 1164 aa4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 NOC2LQ9Y3T9 749 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-213ENST00000474240 PATE3B3GLJ2 98 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 TGM5O43548 720 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 KDM1AO60341 852 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 NRP2O60462 931 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 ZNF202O95125 648 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 EYA4O95677 639 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 MEOX1P50221 254 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 EIF4HQ15056 248 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 MAN2A1Q16706 1144 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 PTPROQ16827 1216 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 BROXQ5VW32 411 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 IQSEC1Q6DN90 963 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 KANSL1Q7Z3B3 1105 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 UBR7Q8N806 425 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 OR5AN1Q8NGI8 311 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 GFM2Q969S9 779 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 NAF1Q96HR8 494 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 HIST1H2AHQ96KK5 128 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 HIST1H2AJQ99878 128 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 PITHD1Q9GZP4 211 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 PUS7LQ9H0K6 701 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 H2AFY2Q9P0M6 372 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 SAE1Q9UBE0 346 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 MSRAQ9UJ68 235 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 COL4A3BPQ9Y5P4 624 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 PCSK5Q92824 1860 aa4.54□□□□□ -1.68
ECHDC1-213ENST00000474240 K7ESF4 209 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 H2AFYO75367 372 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 PRPF6O94906 941 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 EPHB4P54760 987 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 CD83Q01151 205 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 MOGSQ13724 837 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 HDGFL2Q7Z4V5 671 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 NUDT10Q8NFP7 164 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 RTF1Q92541 710 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 NUDT11Q96G61 164 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 CEP89Q96ST8 783 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 DENND2AQ9ULE3 1009 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 NOP58Q9Y2X3 529 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 NUMBLQ9Y6R0 609 aa4.53□□□□□ -1.68
ECHDC1-213ENST00000474240 WASHC2AQ641Q2 1341 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 ZNF623O75123 536 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 MTHFD2P13995 350 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 XPAP23025 273 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 CSF2RBP32927 897 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 RGS3P49796 1198 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 NRG3P56975 720 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 ANAPC15P60006 121 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 TMPRSS15P98073 1019 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 FOXE3Q13461 319 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 MYBPC3Q14896 1274 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 KLHDC10Q6PID8 442 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 LRSAM1Q6UWE0 723 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 ZNF662Q6ZS27 426 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 ARHGEF18Q6ZSZ5 1173 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 STRA8Q7Z7C7 330 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 CXorf67Q86X51 503 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 KBTBD2Q8IY47 623 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 RTKN2Q8IZC4 609 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 CDYL2Q8N8U2 506 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 Q8TCH9 128 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 SSH1Q8WYL5 1049 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 MBD6Q96DN6 1003 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 RAX2Q96IS3 184 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 OSBPL6Q9BZF3 934 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 TRIM8Q9BZR9 551 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 HAPLN2Q9GZV7 340 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 SEMA4AQ9H3S1 761 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 POFUT1Q9H488 388 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 SEC61A2Q9H9S3 476 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 PCDH12Q9NPG4 1184 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 POLR3BQ9NW08 1133 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 TESMINQ9Y4I5 508 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 SLC4A7Q9Y6M7 1214 aa4.52□□□□□ -1.69
ECHDC1-213ENST00000474240 hCG_2014768A0A024R1R8 64 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 A0A0A6YYJ9 748 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 PMS2P1A4D2B8 440 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 OPHN1O60890 802 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 APOL3O95236 402 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 CDK11BP21127 795 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 PPP2CBP62714 309 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 PPP2CAP67775 309 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 PURAQ00577 322 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 FSCN1Q16658 493 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 MIIPQ5JXC2 388 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 PHF19Q5T6S3 580 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 TRIM68Q6AZZ1 485 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 RNF207Q6ZRF8 634 aa4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 DDX42Q86XP3 938 aaKnown RBP eCLIP4.51□□□□□ -1.69
ECHDC1-213ENST00000474240 DNAJC10Q8IXB1 793 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms