RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 KLRC1P26715 233 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 NMT1P30419 496 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 MATR3P43243 847 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 PHKA2P46019 1235 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 NPTX2P47972 431 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 EFNA5P52803 228 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 PURAQ00577 322 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 KNOP1Q1ED39 458 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 MAP3K21Q5TCX8 1036 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 NFRKBQ6P4R8 1299 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 HAUS6Q7Z4H7 955 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 RHPN2Q8IUC4 686 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 DHX40Q8IX18 779 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 TRAPPC12Q8WVT3 735 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 SPIRE2Q8WWL2 714 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 NLRP4Q96MN2 994 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 GLT1D1Q96MS3 346 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 CTAGE1Q96RT6 745 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 TRIM5Q9C035 493 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 POLD4Q9HCU8 107 aa11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 TYW1Q9NV66 732 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 CGNQ9P2M7 1197 aaKnown RBP11.3□□□□□ -0.6
PRPF38A-202ENST00000474048 DENND3A2RUS2 1198 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 K7ERI5 159 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 CETN3O15182 167 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 PRPF6O94906 941 aaKnown RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 C22orf31O95567 290 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 MYCP01106 439 aaPredicted RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 ASGR1P07306 291 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 CYP2C9P11712 490 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 CLCN3P51790 818 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 NCKAP1LP55160 1127 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 FKBP3Q00688 224 aaKnown RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 EHHADHQ08426 723 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 NCBP1Q09161 790 aaKnown RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 MAPK7Q13164 816 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 IQCB1Q15051 598 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 KCNA10Q16322 511 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 CCDC40Q4G0X9 1142 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 MTHFD1LQ6UB35 978 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 ZNF720Q7Z2F6 126 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 DRC7Q8IY82 874 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 GBP3Q9H0R5 595 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 RNF208Q9H0X6 261 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 XPNPEP1Q9NQW7 623 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 SETD4Q9NVD3 440 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 FRMPD3Q5JV73 1810 aa11.29□□□□□ -0.6
PRPF38A-202ENST00000474048 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 PDXKO00764 312 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 ADAMTS4O75173 837 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 GNA14O95837 355 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 EPB41P11171 864 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 MTIF2P46199 727 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 LIG4P49917 911 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 LBX1P52954 281 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 SOX10P56693 466 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 SNRPFP62306 86 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 CAP1Q01518 475 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 LAMTOR4Q0VGL1 99 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 CENPPQ6IPU0 288 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 TAF2Q6P1X5 1199 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 APBB1IPQ7Z5R6 666 aaPredicted RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 DAW1Q8N136 415 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 RNF149Q8NC42 400 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 SCFD1Q8WVM8 642 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 LMBR1Q8WVP7 490 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 TSEN34Q9BSV6 310 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 SRRTQ9BXP5 876 aaKnown RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 FAM49AQ9H0Q0 323 aaPredicted RBP11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 ST6GALNAC4Q9H4F1 302 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 FANCLQ9NW38 375 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 FRMD4BQ9Y2L6 1034 aa11.28□□□□□ -0.6
PRPF38A-202ENST00000474048 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 MYADML2A6NDP7 307 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 INO80B-WBP1J3KQ70 363 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 ERLIN2O94905 339 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 CCL5P13501 91 aa11.27□□□□□ -0.61
PRPF38A-202ENST00000474048 GLRA2P23416 452 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms