RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 LARP4BQ92615 738 aaKnown RBP13.76□□□□□ -0.21
DDX56-209ENST00000473924 RAD54LQ92698 747 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 KIFAP3Q92845 792 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 IPO9Q96P70 1041 aaKnown RBP13.76□□□□□ -0.21
DDX56-209ENST00000473924 RUSC1Q9BVN2 902 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 FTHL17Q9BXU8 183 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 ST3GAL5Q9UNP4 418 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.75□□□□□ -0.21
DDX56-209ENST00000473924 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.75□□□□□ -0.21
DDX56-209ENST00000473924 DENND3A2RUS2 1198 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 HIP1RO75146 1068 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 CSDE1O75534 798 aaKnown RBP13.75□□□□□ -0.21
DDX56-209ENST00000473924 AMHP03971 560 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 KRT18P05783 430 aaKnown RBP13.75□□□□□ -0.21
DDX56-209ENST00000473924 ATP2A2P16615 1042 aaKnown RBP13.75□□□□□ -0.21
DDX56-209ENST00000473924 FGFR4P22455 802 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 GLRA2P23416 452 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 WDR5P61964 334 aaKnown RBP13.75□□□□□ -0.21
DDX56-209ENST00000473924 RAD51AP2Q09MP3 1159 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 CAPSQ13938 189 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 PPP2R5AQ15172 486 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 HABP4Q5JVS0 413 aaKnown RBP13.75□□□□□ -0.21
DDX56-209ENST00000473924 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 CATSPER4Q7RTX7 472 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 SRGAP1Q7Z6B7 1085 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 GPBP1Q86WP2 473 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 DRC1Q96MC2 740 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 TIPINQ9BVW5 301 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 GDPD2Q9HCC8 539 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 POLD4Q9HCU8 107 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
DDX56-209ENST00000473924 INO80B-WBP1J3KQ70 363 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
DDX56-209ENST00000473924 GUCY2CP25092 1073 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 POU5F1BQ06416 359 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 LRIT3Q3SXY7 679 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 RESP18Q5W5W9 173 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 ADALQ6DHV7 355 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 FAM43BQ6ZT52 329 aaPredicted RBP13.74□□□□□ -0.21
DDX56-209ENST00000473924 SV2BQ7L1I2 683 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 ZBTB8OSQ8IWT0 167 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 MYOCDQ8IZQ8 938 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 DEPTORQ8TB45 409 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 LRRC15Q8TF66 581 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 TCHHQ07283 1943 aa13.74□□□□□ -0.21
DDX56-209ENST00000473924 A0A087X0B3 334 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 ERLIN2O94905 339 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 IBSPP21815 317 aaPredicted RBP13.73□□□□□ -0.21
DDX56-209ENST00000473924 NAMPTP43490 491 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 PTENP60484 403 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 DEFB103AP81534 67 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
DDX56-209ENST00000473924 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
DDX56-209ENST00000473924 DMP1Q13316 513 aaPredicted RBP13.73□□□□□ -0.21
DDX56-209ENST00000473924 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX56-209ENST00000473924 IQUBQ8NA54 791 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 PHOSPHO2Q8TCD6 241 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 DHX58Q96C10 678 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 ADAM2Q99965 735 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 PYM1Q9BRP8 204 aaKnown RBP13.73□□□□□ -0.21
DDX56-209ENST00000473924 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 C2orf40Q9H1Z8 148 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 TMX1Q9H3N1 280 aa13.73□□□□□ -0.21
DDX56-209ENST00000473924 NPHP3-ACAD11A0A0J9YXS1 232 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.72□□□□□ -0.21
DDX56-209ENST00000473924 CCDC169A6NNP5 214 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 SFI1A8K8P3 1242 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 GRXCR1A8MXD5 290 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 ENPP3O14638 875 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 POLR2DO15514 142 aaKnown RBP13.72□□□□□ -0.21
DDX56-209ENST00000473924 TBCAO75347 108 aaKnown RBP13.72□□□□□ -0.21
DDX56-209ENST00000473924 UPP2O95045 317 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 CMA1P23946 247 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 PEX3P56589 373 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 NAALADL2Q58DX5 795 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 ARSHQ5FYA8 562 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 FAM109BQ6ICB4 259 aaPredicted RBP13.72□□□□□ -0.21
DDX56-209ENST00000473924 FAM117BQ6P1L5 589 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 IFNLR1Q8IU57 520 aaPredicted RBP13.72□□□□□ -0.21
DDX56-209ENST00000473924 BSNDQ8WZ55 320 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 REEP2Q9BRK0 252 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 NFKBIZQ9BYH8 718 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
DDX56-209ENST00000473924 CUEDC2Q9H467 287 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 MINDY3Q9H8M7 445 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 C17orf75Q9HAS0 396 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 KCNG1Q9UIX4 513 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 KCNH3Q9ULD8 1083 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 ODF2LQ9ULJ1 636 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 PIN4Q9Y237 131 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms