RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 NIPA1Q7RTP0 329 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 FAM228AQ86W67 206 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 PLA2G4DQ86XP0 818 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 CCDC60Q8IWA6 550 aaPredicted RBP7.84□□□□□ -1.15
CKS1B-205ENST00000473344 UBALD2Q8IYN6 164 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 LRRC43Q8N309 656 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 ZNF713Q8N859 430 aaPredicted RBP7.84□□□□□ -1.15
CKS1B-205ENST00000473344 RNF169Q8NCN4 708 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 VN1R2Q8NFZ6 395 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 RASGRP4Q8TDF6 673 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 CASP10Q92851 521 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 TATDN2Q93075 761 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 ASIC4Q96FT7 647 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 ZNF558Q96NG5 402 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 SCLT1Q96NL6 688 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 NECTIN4Q96NY8 510 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 MAP7D2Q96T17 732 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 ZNF577Q9BSK1 485 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 TMEM117Q9H0C3 514 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 CWH43Q9H720 699 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 CDHR5Q9HBB8 845 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 AKT3Q9Y243 479 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 SAMM50Q9Y512 469 aa7.84□□□□□ -1.15
CKS1B-205ENST00000473344 HIDE1A8MVS5 230 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 FSCN2O14926 492 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SLC27A2O14975 620 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 MAGEB2O15479 319 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 ZBTB43O43298 467 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 C22orf31O95567 290 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 CCNE2O96020 404 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 PSAPP07602 524 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 PBX3P40426 434 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 ALDH7A1P49419 539 aaKnown RBP7.83□□□□□ -1.16
CKS1B-205ENST00000473344 FAM189BP81408 668 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SETQ01105 290 aaPredicted RBP7.83□□□□□ -1.16
CKS1B-205ENST00000473344 ITIH3Q06033 890 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SMC1AQ14683 1233 aaKnown RBP7.83□□□□□ -1.16
CKS1B-205ENST00000473344 RTN1Q16799 776 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 CREB3L3Q68CJ9 461 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 MCTP2Q6DN12 878 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SGMS1Q86VZ5 419 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SMAP1Q8IYB5 467 aaPredicted RBP7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SPRYD3Q8NCJ5 442 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 KREMEN2Q8NCW0 462 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 RIPOR3Q96MK2 946 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 S1PR5Q9H228 398 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 MFSD1Q9H3U5 465 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 ANO2Q9NQ90 1003 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 TBC1D22BQ9NU19 505 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 BARHL2Q9NY43 387 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SPG21Q9NZD8 308 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 NAP1L2Q9ULW6 460 aaPredicted RBP7.83□□□□□ -1.16
CKS1B-205ENST00000473344 SORCS3Q9UPU3 1222 aa7.83□□□□□ -1.16
CKS1B-205ENST00000473344 CNTNAP5Q8WYK1 1306 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 FAM86B1E9PN63 330 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 NRG2O14511 850 aaPredicted RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 GPR32O75388 356 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 FAM86B2P0C5J1 330 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 EIF4BP23588 611 aaKnown RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 GGCXP38435 758 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 MTHFRP42898 656 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 CLCN3P51790 818 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 TTC3P53804 2025 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 NLRP11P59045 1033 aaKnown RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 FGD1P98174 961 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 KCNC3Q14003 757 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 JAKMIP3Q5VZ66 844 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 ZNF746Q6NUN9 644 aaPredicted RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 EFCAB12Q6NXP0 572 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 SYCE2Q6PIF2 218 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 APOA5Q6Q788 366 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 LRRC55Q6ZSA7 311 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 MRPL43Q8N983 215 aaKnown RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 CCDC12Q8WUD4 166 aaPredicted RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 NLRP7Q8WX94 980 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 TMEM169Q96HH4 297 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 FAM167AQ96KS9 214 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 CASD1Q96PB1 797 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 MRPL9Q9BYD2 267 aaKnown RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 LSG1Q9H089 658 aaKnown RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 ZMYND15Q9H091 742 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 ADAM7Q9H2U9 754 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 NRBP2Q9NSY0 501 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 GABBR1Q9UBS5 961 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 DBR1Q9UK59 544 aaKnown RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 PCDHA10Q9Y5I2 948 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 MAFBQ9Y5Q3 323 aaPredicted RBP7.82□□□□□ -1.16
CKS1B-205ENST00000473344 HCFC2Q9Y5Z7 792 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 ATG2AQ2TAZ0 1938 aa7.82□□□□□ -1.16
CKS1B-205ENST00000473344 A0A0U1RQF3 1178 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.81□□□□□ -1.16
CKS1B-205ENST00000473344 GOLGA8AA7E2F4 631 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 GOLGA8BA8MQT2 603 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 ZBTB42B2RXF5 422 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 DHX15O43143 795 aaKnown RBP7.81□□□□□ -1.16
CKS1B-205ENST00000473344 CXCL14O95715 111 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 EOMESO95936 686 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 PDGFBP01127 241 aaPredicted RBP7.81□□□□□ -1.16
CKS1B-205ENST00000473344 TPM2P07951 284 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms