RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 CDCA3Q99618 268 aaPredicted RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 FDXACB1Q9BRP7 624 aaPredicted RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 GBP3Q9H0R5 595 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 NRBP2Q9NSY0 501 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
ACTB-209ENST00000473257 CEP131Q9UPN4 1083 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 LZTS1Q9Y250 596 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 INPP5FQ9Y2H2 1132 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 HCFC2Q9Y5Z7 792 aa12.64□□□□□ -0.39
ACTB-209ENST00000473257 PTPRZ1P23471 2315 aaPredicted RBP12.63□□□□□ -0.39
ACTB-209ENST00000473257 RIF1Q5UIP0 2472 aaKnown RBP12.63□□□□□ -0.39
ACTB-209ENST00000473257 A0A0U1RQF3 1178 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 ZC3H11AO75152 810 aaKnown RBP eCLIP12.63□□□□□ -0.39
ACTB-209ENST00000473257 CXCL14O95715 111 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
ACTB-209ENST00000473257 EPCAMP16422 314 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 TMOD1P28289 359 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 GNA11P29992 359 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 HSPA4P34932 840 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 AFF1P51825 1210 aaKnown RBP12.63□□□□□ -0.39
ACTB-209ENST00000473257 NLRP5P59047 1200 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 KRT17Q04695 432 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 SIGLEC14Q08ET2 396 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 TMEM184AQ6ZMB5 413 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
ACTB-209ENST00000473257 MIER3Q7Z3K6 550 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 TEX2Q8IWB9 1127 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 MRPL43Q8N983 215 aaKnown RBP12.63□□□□□ -0.39
ACTB-209ENST00000473257 KREMEN2Q8NCW0 462 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 CCDC12Q8WUD4 166 aaPredicted RBP12.63□□□□□ -0.39
ACTB-209ENST00000473257 VN1R3Q9BXE9 311 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 NID2Q14112 1375 aa12.63□□□□□ -0.39
ACTB-209ENST00000473257 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.62□□□□□ -0.39
ACTB-209ENST00000473257 EML1O00423 815 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 HOXA2O43364 376 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 PSMD10O75832 226 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 BRD1O95696 1058 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
ACTB-209ENST00000473257 MYBP10242 640 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 IFNAR1P17181 557 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 STK3Q13188 491 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 TOB2Q14106 344 aaPredicted RBP12.62□□□□□ -0.39
ACTB-209ENST00000473257 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
ACTB-209ENST00000473257 PDE12Q6L8Q7 609 aaKnown RBP12.62□□□□□ -0.39
ACTB-209ENST00000473257 VPS52Q8N1B4 723 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 NLRP4Q96MN2 994 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 RIT2Q99578 217 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 KCNH6Q9H252 994 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 NGRNQ9NPE2 291 aaKnown RBP12.62□□□□□ -0.39
ACTB-209ENST00000473257 SUCLA2Q9P2R7 463 aaPredicted RBP12.62□□□□□ -0.39
ACTB-209ENST00000473257 DNAJB4Q9UDY4 337 aa12.62□□□□□ -0.39
ACTB-209ENST00000473257 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
ACTB-209ENST00000473257 H0Y858 1186 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 SLC37A4O43826 429 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 AVPR2P30518 371 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 PPM1AP35813 382 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 PHKA2P46019 1235 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 SLC11A1P49279 550 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 JAK3P52333 1124 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 PTPN5P54829 565 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 NPEPPSP55786 919 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 NPY5RQ15761 445 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 TWF2Q6IBS0 349 aaKnown RBP12.61□□□□□ -0.39
ACTB-209ENST00000473257 ZNF280BQ86YH2 543 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 RHPN2Q8IUC4 686 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 BICD2Q8TD16 824 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 RNF26Q9BY78 433 aaPredicted RBP12.61□□□□□ -0.39
ACTB-209ENST00000473257 AGXT2Q9BYV1 514 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 GCOM2Q9BZD3 368 aaPredicted RBP12.61□□□□□ -0.39
ACTB-209ENST00000473257 NRDE2Q9H7Z3 1164 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 GJB4Q9NTQ9 266 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
ACTB-209ENST00000473257 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
ACTB-209ENST00000473257 KCNJ14Q9UNX9 436 aa12.61□□□□□ -0.39
ACTB-209ENST00000473257 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 ALDH7A1P49419 539 aaKnown RBP12.6□□□□□ -0.39
ACTB-209ENST00000473257 USP11P51784 963 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 INF2Q27J81 1249 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 XKR3Q5GH77 459 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 MCTP2Q6DN12 878 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 B3GNT9Q6UX72 402 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 TMC5Q6UXY8 1006 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 ANO5Q75V66 913 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 ETNPPLQ8TBG4 499 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 CASP10Q92851 521 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 TMEM143Q96AN5 459 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 TMEM169Q96HH4 297 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 NIFKQ9BYG3 293 aaKnown RBP12.6□□□□□ -0.39
ACTB-209ENST00000473257 ZBP1Q9H171 429 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 ADAM7Q9H2U9 754 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 MINDY3Q9H8M7 445 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 LIMD1Q9UGP4 676 aa12.6□□□□□ -0.39
ACTB-209ENST00000473257 PCDHA4Q9UN74 947 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms