RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 WASH6PQ9NQA3 447 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 C14orf119Q9NWQ9 140 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 RAI14Q9P0K7 980 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 ADGRE2Q9UHX3 823 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 MAGED2Q9UNF1 606 aaPredicted RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 PCDHGA9Q9Y5G4 932 aaKnown RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 PCDHGA8Q9Y5G5 932 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 PCDHGA7Q9Y5G6 932 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 PCDHGA6Q9Y5G7 932 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 PCDHGA3Q9Y5H0 932 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 PCDHGA2Q9Y5H1 932 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 SETBP1Q9Y6X0 1596 aa6.73□□□□□ -1.33
RTF1-203ENST00000473214 SOS1Q07889 1333 aaPredicted RBP6.73□□□□□ -1.33
RTF1-203ENST00000473214 TNRQ92752 1358 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 KLHL33A6NCF5 533 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 FAM86C2PA6NEL3 165 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 H7C0S8 307 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 FYB1O15117 783 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 AKR1B10O60218 316 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 ADAM11O75078 769 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 ULK1O75385 1050 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 MAFO75444 373 aaPredicted RBP6.72□□□□□ -1.33
RTF1-203ENST00000473214 SKAP2O75563 359 aaPredicted RBP6.72□□□□□ -1.33
RTF1-203ENST00000473214 TPPPO94811 219 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 XBP1P17861 261 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 CES1P23141 567 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 PRPHP41219 470 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 LIFRP42702 1097 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 MAPK10P53779 464 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 PPP2R2AP63151 447 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 SLC7A5Q01650 507 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 TAF5Q15542 800 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 DUOXA2Q1HG44 320 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 INF2Q27J81 1249 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 SLC30A6Q6NXT4 461 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 RFX8Q6ZV50 586 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 OVCH2Q7RTZ1 564 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 NLRP14Q86W24 1093 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 CLEC10AQ8IUN9 316 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 FAM20CQ8IXL6 584 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 GRAMD1CQ8IYS0 662 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 RTKN2Q8IZC4 609 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 GSTCDQ8NEC7 633 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 PPP1R35Q8TAP8 253 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 GSDMBQ8TAX9 411 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 TRAPPC12Q8WVT3 735 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 KLHL6Q8WZ60 621 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 PMEPA1Q969W9 287 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 SCLYQ96I15 445 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 NCAPGQ9BPX3 1015 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 TREX2Q9BQ50 279 aaPredicted RBP6.72□□□□□ -1.33
RTF1-203ENST00000473214 FAM83CQ9BQN1 747 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 VPS33BQ9H267 617 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 RASSF4Q9H2L5 321 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 BHMT2Q9H2M3 363 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 ZFYVE1Q9HBF4 777 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 PIH1D1Q9NWS0 290 aaKnown RBP6.72□□□□□ -1.33
RTF1-203ENST00000473214 ZHX1Q9UKY1 873 aaPredicted RBP6.72□□□□□ -1.33
RTF1-203ENST00000473214 AGTPBP1Q9UPW5 1226 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 A2MP01023 1474 aa6.72□□□□□ -1.33
RTF1-203ENST00000473214 FAM227AF5H4B4 570 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 INO80B-WBP1J3KQ70 363 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 ATE1O95260 518 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 STARD3NLO95772 234 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 KRT1P04264 644 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 C6orf222P0C671 652 aaPredicted RBP6.71□□□□□ -1.34
RTF1-203ENST00000473214 FGFR1P11362 822 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 EPHA1P21709 976 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 CDC25BP30305 580 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 TECP42680 631 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 KCNJ6P48051 423 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 JAG1P78504 1218 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 PRKG1Q13976 671 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 PDE3AQ14432 1141 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 SF3B3Q15393 1217 aaKnown RBP6.71□□□□□ -1.34
RTF1-203ENST00000473214 GNPTABQ3T906 1256 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 PGBD2Q6P3X8 592 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 ABRAXAS1Q6UWZ7 409 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 CCAR2Q8N163 923 aaKnown RBP6.71□□□□□ -1.34
RTF1-203ENST00000473214 CAMKK1Q8N5S9 505 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 ANKRD52Q8NB46 1076 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 GRIN3AQ8TCU5 1115 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 TMEM40Q8WWA1 233 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 RSAD2Q8WXG1 361 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 TAF4BQ92750 862 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 DIO2Q92813 273 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 PPP1R14AQ96A00 147 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 ARL8AQ96BM9 186 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 TIGD1Q96MW7 591 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 SLF1Q9BQI6 1058 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 STK31Q9BXU1 1019 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 PBX4Q9BYU1 374 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 KIAA1683Q9H0B3 1180 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
RTF1-203ENST00000473214 DACT1Q9NYF0 836 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 POLR3KQ9Y2Y1 108 aaPredicted RBP6.71□□□□□ -1.34
RTF1-203ENST00000473214 MAP3K1Q13233 1512 aa6.71□□□□□ -1.34
RTF1-203ENST00000473214 UGGT1Q9NYU2 1555 aa6.7□□□□□ -1.34
RTF1-203ENST00000473214 FAM135BQ49AJ0 1406 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms