RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 U2AF2P26368 475 aaKnown RBP eCLIP17.38■□□□□ 0.372e-8■□□□□ 10
MRPL55-226ENST00000473066 TECP42680 631 aa17.38■□□□□ 0.37
MRPL55-226ENST00000473066 GATMP50440 423 aa17.38■□□□□ 0.37
MRPL55-226ENST00000473066 TFDP1Q14186 410 aa17.38■□□□□ 0.37
MRPL55-226ENST00000473066 TWF2Q6IBS0 349 aaKnown RBP17.38■□□□□ 0.37
MRPL55-226ENST00000473066 CRIPAKQ8N1N5 446 aa17.38■□□□□ 0.37
MRPL55-226ENST00000473066 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
MRPL55-226ENST00000473066 HSD17B14Q9BPX1 270 aa17.38■□□□□ 0.37
MRPL55-226ENST00000473066 CHST12Q9NRB3 414 aa17.38■□□□□ 0.37
MRPL55-226ENST00000473066 PIN4Q9Y237 131 aaKnown RBP17.38■□□□□ 0.37
MRPL55-226ENST00000473066 TRANK1O15050 2925 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 CSDE1O75534 798 aaKnown RBP17.37■□□□□ 0.37
MRPL55-226ENST00000473066 SKIP12755 728 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 PHKA2P46019 1235 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 LAMTOR4Q0VGL1 99 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 MXD4Q14582 209 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-226ENST00000473066 NAALADL2Q58DX5 795 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 ECHDC2Q86YB7 292 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 KSR1Q8IVT5 923 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 PRPF31Q8WWY3 499 aaKnown RBP17.37■□□□□ 0.37
MRPL55-226ENST00000473066 P2RX5Q93086 422 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 HLA-CQ95604 372 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 TMEM117Q9H0C3 514 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 PCDHB12Q9Y5F1 795 aa17.37■□□□□ 0.37
MRPL55-226ENST00000473066 USO1O60763 962 aaKnown RBP17.36■□□□□ 0.37
MRPL55-226ENST00000473066 ERLIN2O94905 339 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 SRGAP2CP0DJJ0 459 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 FGFR1P11362 822 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 RAB27AP51159 221 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 FAM189BP81408 668 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 FAM102BQ5T8I3 360 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 SRGAP1Q7Z6B7 1085 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 FERMT3Q86UX7 667 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 LRRC43Q8N309 656 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 RNF149Q8NC42 400 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 PIGOQ8TEQ8 1089 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 PPP2R3CQ969Q6 453 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 ASB2Q96Q27 587 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 POLR3CQ9BUI4 534 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-226ENST00000473066 COL25A1Q9BXS0 654 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-226ENST00000473066 NSUN3Q9H649 340 aaKnown RBP17.36■□□□□ 0.37
MRPL55-226ENST00000473066 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
MRPL55-226ENST00000473066 EYSQ5T1H1 3165 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 LAD1O00515 517 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 ZBTB39O15060 712 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 CSPG5O95196 566 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 EOMESO95936 686 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
MRPL55-226ENST00000473066 LAG3P18627 525 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 RARRES1P49788 294 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 NBR1Q14596 966 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 RILPL1Q5EBL4 403 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 NACC1Q96RE7 527 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 LRWD1Q9UFC0 647 aa17.35■□□□□ 0.37
MRPL55-226ENST00000473066 A0A0U1RQF3 1178 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 ARHGEF35A5YM69 484 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 GRM6O15303 877 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 LINC00271P0C7V0 271 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 MUTP22033 750 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 RPA1P27694 616 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 MYH11P35749 1972 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 CCT6AP40227 531 aaKnown RBP17.34■□□□□ 0.37
MRPL55-226ENST00000473066 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
MRPL55-226ENST00000473066 NCBP1Q09161 790 aaKnown RBP17.34■□□□□ 0.37
MRPL55-226ENST00000473066 PTGDRQ13258 359 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 POTEGQ6S5H5 508 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 CATSPER3Q86XQ3 398 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 THNSL1Q8IYQ7 743 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 MCPH1Q8NEM0 835 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 MRPL9Q9BYD2 267 aaKnown RBP17.34■□□□□ 0.37
MRPL55-226ENST00000473066 BACH2Q9BYV9 841 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 UBE2ZQ9H832 354 aaPredicted RBP17.34■□□□□ 0.37
MRPL55-226ENST00000473066 IFT122Q9HBG6 1241 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 XPNPEP1Q9NQW7 623 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 AGPAT5Q9NUQ2 364 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 PCDHB6Q9Y5E3 794 aa17.34■□□□□ 0.37
MRPL55-226ENST00000473066 MED24O75448 989 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 SPATA31C1P0DKV0 1188 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 TFF2Q03403 129 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 TCEAL5Q5H9L2 206 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 LARP1BQ659C4 914 aaKnown RBP17.33■□□□□ 0.36
MRPL55-226ENST00000473066 EP400NLQ6ZTU2 488 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 KLHL23Q8NBE8 558 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 SNX29Q8TEQ0 813 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 POLR3FQ9H1D9 316 aaPredicted RBP17.33■□□□□ 0.36
MRPL55-226ENST00000473066 ALG13Q9NP73 1137 aaKnown RBP17.33■□□□□ 0.36
MRPL55-226ENST00000473066 FAM105AQ9NUU6 356 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 DBR1Q9UK59 544 aaKnown RBP17.33■□□□□ 0.36
MRPL55-226ENST00000473066 PLAGL2Q9UPG8 496 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 PRUNE2Q8WUY3 3088 aa17.33■□□□□ 0.36
MRPL55-226ENST00000473066 TDRD15B5MCY1 1934 aaKnown RBP17.33■□□□□ 0.36
MRPL55-226ENST00000473066 INO80B-WBP1J3KQ70 363 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 ITGB1P05556 798 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 PPM1AP35813 382 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 PRPHP41219 470 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 PCBP1Q15365 356 aaKnown RBP eCLIP17.32■□□□□ 0.36
MRPL55-226ENST00000473066 GLB1LQ6UWU2 654 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 COLGALT1Q8NBJ5 622 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms