RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ADALQ6DHV7 355 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 SRGAP1Q7Z6B7 1085 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 FAM228AQ86W67 206 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 ASAP3Q8TDY4 903 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 LARP4BQ92615 738 aaKnown RBP23.04■■□□□ 1.28
TOP3A-204ENST00000472959 IFT122Q9HBG6 1241 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 FAM13BQ9NYF5 915 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 ST3GAL5Q9UNP4 418 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 SCN5AQ14524 2016 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 SFPQP23246 707 aaKnown RBP eCLIP23.03■■□□□ 1.28
TOP3A-204ENST00000472959 PPP2R5AQ15172 486 aa23.03■■□□□ 1.28
TOP3A-204ENST00000472959 RESP18Q5W5W9 173 aa23.03■■□□□ 1.28
TOP3A-204ENST00000472959 PHOSPHO2Q8TCD6 241 aa23.03■■□□□ 1.28
TOP3A-204ENST00000472959 LRRC15Q8TF66 581 aa23.03■■□□□ 1.28
TOP3A-204ENST00000472959 DRC1Q96MC2 740 aa23.03■■□□□ 1.28
TOP3A-204ENST00000472959 NFKBIZQ9BYH8 718 aa23.03■■□□□ 1.28
TOP3A-204ENST00000472959 STAT6P42226 847 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 PTENP60484 403 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 WDR5P61964 334 aaKnown RBP23.02■■□□□ 1.28
TOP3A-204ENST00000472959 CAPSQ13938 189 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 MCM6Q14566 821 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 PCBP1Q15365 356 aaKnown RBP eCLIP23.02■■□□□ 1.28
TOP3A-204ENST00000472959 NAALADL2Q58DX5 795 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 GPBP1Q86WP2 473 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 IFNLR1Q8IU57 520 aaPredicted RBP23.02■■□□□ 1.28
TOP3A-204ENST00000472959 IFT74Q96LB3 600 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 SLC9A7Q96T83 725 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 PYM1Q9BRP8 204 aaKnown RBP23.02■■□□□ 1.28
TOP3A-204ENST00000472959 PANK2Q9BZ23 570 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 C17orf75Q9HAS0 396 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 RANBP2P49792 3224 aaKnown RBP23.02■■□□□ 1.28
TOP3A-204ENST00000472959 TET1Q8NFU7 2136 aa23.02■■□□□ 1.28
TOP3A-204ENST00000472959 ARID2Q68CP9 1835 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.01■■□□□ 1.27
TOP3A-204ENST00000472959 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.01■■□□□ 1.27
TOP3A-204ENST00000472959 HIP1RO75146 1068 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 AMHP03971 560 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 CMA1P23946 247 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 HABP4Q5JVS0 413 aaKnown RBP23.01■■□□□ 1.27
TOP3A-204ENST00000472959 SV2BQ7L1I2 683 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 IQUBQ8NA54 791 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 TMX1Q9H3N1 280 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 CUEDC2Q9H467 287 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 KCNG1Q9UIX4 513 aa23.01■■□□□ 1.27
TOP3A-204ENST00000472959 A0A087X0B3 334 aa23■■□□□ 1.27
TOP3A-204ENST00000472959 ENPP3O14638 875 aa23■■□□□ 1.27
TOP3A-204ENST00000472959 ATP2A2P16615 1042 aaKnown RBP23■■□□□ 1.27
TOP3A-204ENST00000472959 NAMPTP43490 491 aa23■■□□□ 1.27
TOP3A-204ENST00000472959 DHX8Q14562 1220 aaKnown RBP23■■□□□ 1.27
TOP3A-204ENST00000472959 ARSHQ5FYA8 562 aa23■■□□□ 1.27
TOP3A-204ENST00000472959 PDILTQ8N807 584 aa23■■□□□ 1.27
TOP3A-204ENST00000472959 TSPYL2Q9H2G4 693 aaPredicted RBP23■■□□□ 1.27
TOP3A-204ENST00000472959 ODF2LQ9ULJ1 636 aa23■■□□□ 1.27
TOP3A-204ENST00000472959 A0A1W2PQ27 194 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 A0A1W2PQ64 194 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 A0A1W2PQD8 194 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 LRRIQ4A6NIV6 560 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 CSDE1O75534 798 aaKnown RBP22.99■■□□□ 1.27
TOP3A-204ENST00000472959 MAPK7Q13164 816 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 CATSPER4Q7RTX7 472 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 DAW1Q8N136 415 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 BSNDQ8WZ55 320 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 C2orf40Q9H1Z8 148 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 CHST12Q9NRB3 414 aa22.99■■□□□ 1.27
TOP3A-204ENST00000472959 TRIOBPQ9H2D6 2365 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.98■■□□□ 1.27
TOP3A-204ENST00000472959 DENND3A2RUS2 1198 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 KRT18P05783 430 aaKnown RBP22.98■■□□□ 1.27
TOP3A-204ENST00000472959 ZSCAN20P17040 1043 aaPredicted RBP22.98■■□□□ 1.27
TOP3A-204ENST00000472959 SMAD3P84022 425 aaKnown RBP22.98■■□□□ 1.27
TOP3A-204ENST00000472959 DMP1Q13316 513 aaPredicted RBP22.98■■□□□ 1.27
TOP3A-204ENST00000472959 E2F4Q16254 413 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 CDCA2Q69YH5 1023 aaPredicted RBP22.98■■□□□ 1.27
TOP3A-204ENST00000472959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.98■■□□□ 1.27
TOP3A-204ENST00000472959 ZBTB8OSQ8IWT0 167 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 DEPTORQ8TB45 409 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 MINDY3Q9H8M7 445 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 GDPD2Q9HCC8 539 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 POLD4Q9HCU8 107 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 C1orf112Q9NSG2 853 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 KCNH3Q9ULD8 1083 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 LOXHD1Q8IVV2 1947 aa22.98■■□□□ 1.27
TOP3A-204ENST00000472959 INO80B-WBP1J3KQ70 363 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 POLR2DO15514 142 aaKnown RBP22.97■■□□□ 1.27
TOP3A-204ENST00000472959 FGFR4P22455 802 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 EFNA5P52803 228 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 DEFB103AP81534 67 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 MBTD1Q05BQ5 628 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 NCBP1Q09161 790 aaKnown RBP22.97■■□□□ 1.27
TOP3A-204ENST00000472959 RAD51AP2Q09MP3 1159 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 DSC3Q14574 896 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 CSPP1Q1MSJ5 1256 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 RTN4RL1Q86UN2 441 aaPredicted RBP22.97■■□□□ 1.27
TOP3A-204ENST00000472959 HERC6Q8IVU3 1022 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 DHX58Q96C10 678 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 ADAM2Q99965 735 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 REEP2Q9BRK0 252 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 LRRC27Q9C0I9 530 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 MAGEF1Q9HAY2 307 aa22.97■■□□□ 1.27
TOP3A-204ENST00000472959 RGS18Q9NS28 235 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms