RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 CEP135Q66GS9 1140 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 TRIM59Q8IWR1 403 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 COPS5Q92905 334 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 NAA15Q9BXJ9 866 aaKnown RBP16.03■□□□□ 0.16
HIF3A-206ENST00000472815 XPNPEP1Q9NQW7 623 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 AGPAT3Q9NRZ7 376 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.03■□□□□ 0.16
HIF3A-206ENST00000472815 TRPC6Q9Y210 931 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 PHLPP2Q6ZVD8 1323 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 MAFO75444 373 aaPredicted RBP16.02■□□□□ 0.16
HIF3A-206ENST00000472815 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.16
HIF3A-206ENST00000472815 TRIM21P19474 475 aaKnown RBP16.02■□□□□ 0.16
HIF3A-206ENST00000472815 NAMPTP43490 491 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 TNFAIP2Q03169 654 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 KCNA1Q09470 495 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 LRMPQ12912 555 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 C12orf56Q8IXR9 622 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 PANX2Q96RD6 677 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 TBX20Q9UMR3 447 aa16.02■□□□□ 0.16
HIF3A-206ENST00000472815 DENND3A2RUS2 1198 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 CLIC2O15247 247 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 MARK3P27448 753 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 KCNJ6P48051 423 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 PLCB4Q15147 1175 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 IER5Q5VY09 327 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 MAP4K3Q8IVH8 894 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 ZNF397Q8NF99 534 aaPredicted RBP16.02■□□□□ 0.15
HIF3A-206ENST00000472815 OR6J1Q8NGC5 347 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 USP6NLQ92738 828 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 KCNN1Q92952 543 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 CFHR5Q9BXR6 569 aa16.02■□□□□ 0.15
HIF3A-206ENST00000472815 COL1A2P08123 1366 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 CCP110O43303 1012 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 STX10O60499 249 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 MFAP3LO75121 409 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 LGALS2P05162 132 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 CCZ1BP86790 482 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 CCZ1P86791 482 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-206ENST00000472815 RBL2Q08999 1139 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 STRN3Q13033 797 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 MXD4Q14582 209 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-206ENST00000472815 KIF22Q14807 665 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 SYCP1Q15431 976 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 DGKDQ16760 1214 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 BRDTQ58F21 947 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-206ENST00000472815 FIGNQ5HY92 759 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 ZNF484Q5JVG2 852 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 FAM186BQ8IYM0 893 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 DEPTORQ8TB45 409 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 KIAA1524Q8TCG1 905 aa16.01■□□□□ 0.15
HIF3A-206ENST00000472815 LUC7L2Q9Y383 392 aaKnown RBP16.01■□□□□ 0.15
HIF3A-206ENST00000472815 EXOC3O60645 756 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 GYPCP04921 128 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 CYP2B6P20813 491 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 CASP14P31944 242 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 ARL2P36404 184 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 ARID5BQ14865 1188 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 TRIM50Q86XT4 487 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 TC2NQ8N9U0 490 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 AFG1LQ8WV93 481 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 PSPC1Q8WXF1 523 aaKnown RBP16■□□□□ 0.15
HIF3A-206ENST00000472815 CEP89Q96ST8 783 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 BAG1Q99933 345 aaPredicted RBP16■□□□□ 0.15
HIF3A-206ENST00000472815 BEGAINQ9BUH8 593 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 DMAC2Q9NW81 257 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 RNF186Q9NXI6 227 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 SAGE1Q9NXZ1 904 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 ARHGAP28Q9P2N2 729 aa16■□□□□ 0.15
HIF3A-206ENST00000472815 MAPK13O15264 365 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 MAGEB2O15479 319 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 ARHGAP6O43182 974 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 TRPA1O75762 1119 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 AKAP3O75969 853 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 AFPP02771 609 aaKnown RBP15.99■□□□□ 0.15
HIF3A-206ENST00000472815 KRT13P13646 458 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 SMPD1P17405 629 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 CYP2J2P51589 502 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 PTPN21Q16825 1174 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 TCERG1LQ5VWI1 586 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 USP37Q86T82 979 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 KSR1Q8IVT5 923 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 CPLX3Q8WVH0 158 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 TMEM143Q96AN5 459 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 GJD2Q9UKL4 321 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.99■□□□□ 0.15
HIF3A-206ENST00000472815 A0A1W2PQJ5 194 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 KIAA0391O15091 583 aaKnown RBP15.99■□□□□ 0.15
HIF3A-206ENST00000472815 MMP3P08254 477 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 EFNA5P52803 228 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 ADKP55263 362 aaKnown RBP15.99■□□□□ 0.15
HIF3A-206ENST00000472815 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 TFDP1Q14186 410 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 INTS8Q75QN2 995 aaKnown RBP15.99■□□□□ 0.15
HIF3A-206ENST00000472815 XXYLT1Q8NBI6 393 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 BSNDQ8WZ55 320 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 BICD1Q96G01 975 aa15.99■□□□□ 0.15
HIF3A-206ENST00000472815 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms