RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
IRF1-208ENST00000472045 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 STRIP2Q9ULQ0 834 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 KIAA0391O15091 583 aaKnown RBP13.19□□□□□ -0.3
IRF1-208ENST00000472045 KRT39Q6A163 491 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 RUFY4Q6ZNE9 571 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 PASKQ96RG2 1323 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 ITGA4P13612 1032 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 PSMA2P25787 234 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 EFCAB12Q6NXP0 572 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 C17orf53Q8N3J3 647 aaPredicted RBP13.19□□□□□ -0.3
IRF1-208ENST00000472045 FAM76AQ8TAV0 307 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 DPF3Q92784 378 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 M0QYV0 167 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
IRF1-208ENST00000472045 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
IRF1-208ENST00000472045 TSTA3Q13630 321 aaPredicted RBP13.19□□□□□ -0.3
IRF1-208ENST00000472045 KRT31Q15323 416 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 LRRC31Q6UY01 552 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 ADORA2BP29275 332 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
IRF1-208ENST00000472045 HERVK_113P62684 666 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 C10orf76Q5T2E6 689 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 ARHGEF18Q6ZSZ5 1173 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.18□□□□□ -0.3
IRF1-208ENST00000472045 TTC1Q99614 292 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
IRF1-208ENST00000472045 RUNDC3BQ96NL0 473 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 NCAPGQ9BPX3 1015 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 VIMP08670 466 aaKnown RBP13.18□□□□□ -0.3
IRF1-208ENST00000472045 CLCN1P35523 988 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 CC2D1AQ6P1N0 951 aaPredicted RBP13.18□□□□□ -0.3
IRF1-208ENST00000472045 NDUFAF2Q8N183 169 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 CDKL2Q92772 493 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 DPH5Q9H2P9 285 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 VPS18Q9P253 973 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 TRPA1O75762 1119 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 THPOP40225 353 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 PTPN21Q16825 1174 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 DARS2Q6PI48 645 aaKnown RBP13.18□□□□□ -0.3
IRF1-208ENST00000472045 DNAAF3Q8N9W5 541 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 PARD3BQ8TEW8 1205 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 TNIP3Q96KP6 325 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 MAD2L2Q9UI95 211 aa13.18□□□□□ -0.3
IRF1-208ENST00000472045 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
IRF1-208ENST00000472045 UBE4BO95155 1302 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 I3L4J1 428 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 NMT1P30419 496 aaKnown RBP13.17□□□□□ -0.3
IRF1-208ENST00000472045 PRCPP42785 496 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 CAPN12Q6ZSI9 719 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 TSC1Q92574 1164 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 SAT1P21673 171 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 NNMTP40261 264 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 ERCC6LQ2NKX8 1250 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 GUF1Q8N442 669 aaKnown RBP13.17□□□□□ -0.3
IRF1-208ENST00000472045 RDM1Q8NG50 284 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 PLCB1Q9NQ66 1216 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 UBR1Q8IWV7 1749 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 LRRC8AQ8IWT6 810 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
IRF1-208ENST00000472045 STAP1Q9ULZ2 295 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 PCDHB7Q9Y5E2 793 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 YWHAGP61981 247 aaKnown RBP eCLIP13.17□□□□□ -0.3
IRF1-208ENST00000472045 PPATQ06203 517 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 SPATA2LQ8IUW3 424 aaPredicted RBP13.17□□□□□ -0.3
IRF1-208ENST00000472045 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 GDAP1Q8TB36 358 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 MAGOHBQ96A72 148 aaKnown RBP13.17□□□□□ -0.3
IRF1-208ENST00000472045 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 FNDC3AQ9Y2H6 1198 aaKnown RBP13.17□□□□□ -0.3
IRF1-208ENST00000472045 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
IRF1-208ENST00000472045 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 ZWILCHQ9H900 591 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 UBN1Q9NPG3 1134 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 KCND2Q9NZV8 630 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 BFSP2Q13515 415 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 STARD7Q9NQZ5 370 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 SLC26A4O43511 780 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 CALB1P05937 261 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms