RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 UBE3AQ05086 875 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 CTTNQ14247 550 aaKnown RBP12.89□□□□□ -0.35
COL4A3-205ENST00000471862 CLLU1OSQ5K130 101 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 LRRC55Q6ZSA7 311 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 COLGALT1Q8NBJ5 622 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 SLC7A3Q8WY07 619 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 HSD17B14Q9BPX1 270 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 INO80BQ9C086 356 aaPredicted RBP12.89□□□□□ -0.35
COL4A3-205ENST00000471862 TMEM60Q9H2L4 133 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
COL4A3-205ENST00000471862 IFT122Q9HBG6 1241 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
COL4A3-205ENST00000471862 DACT1Q9NYF0 836 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 PCDHA12Q9UN75 941 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 H3BQ06 376 aaPredicted RBP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 GAS2O43903 313 aaKnown RBP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 EOMESO95936 686 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 IL9P15248 144 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 LAG3P18627 525 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 GTF2F1P35269 517 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 POLGP54098 1239 aaPredicted RBP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 OTUD6AQ7L8S5 288 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 ADGRD2Q7Z7M1 963 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 EXOC8Q8IYI6 725 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 PSPC1Q8WXF1 523 aaKnown RBP12.88□□□□□ -0.35
COL4A3-205ENST00000471862 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 NLRP4Q96MN2 994 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 CLDND1Q9NY35 253 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 PCDHB12Q9Y5F1 795 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
COL4A3-205ENST00000471862 TBX10O75333 385 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 FGF18O76093 207 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 CSPG5O95196 566 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 TXKP42681 527 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 PHKA2P46019 1235 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 PLCB3Q01970 1234 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 DLX2Q07687 328 aaPredicted RBP12.87□□□□□ -0.35
COL4A3-205ENST00000471862 ADAM15Q13444 863 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 EMC2Q15006 297 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 SAFBQ15424 915 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL4A3-205ENST00000471862 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 PUS10Q3MIT2 529 aaKnown RBP12.87□□□□□ -0.35
COL4A3-205ENST00000471862 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 SPOUT1Q5T280 376 aaKnown RBP12.87□□□□□ -0.35
COL4A3-205ENST00000471862 FAM178BQ8IXR5 827 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 FBXO18Q8NFZ0 1043 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
COL4A3-205ENST00000471862 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
COL4A3-205ENST00000471862 MINDY3Q9H8M7 445 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 CD320Q9NPF0 282 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
COL4A3-205ENST00000471862 ANKEF1Q9NU02 776 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 PCDHGC5Q9Y5F6 944 aa12.87□□□□□ -0.35
COL4A3-205ENST00000471862 POTEMA6NI47 508 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 FSCN2O14926 492 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 LINC01565O15544 149 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 ASAP2O43150 1006 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 ZNF623O75123 536 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 ERVFC1P60507 584 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 LAMTOR4Q0VGL1 99 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
COL4A3-205ENST00000471862 KCNT2Q6UVM3 1135 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 CATSPER4Q7RTX7 472 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 SRGAP1Q7Z6B7 1085 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 TPH2Q8IWU9 490 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 ABI1Q8IZP0 508 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 HELQQ8TDG4 1101 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 RSPH1Q8WYR4 309 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL4A3-205ENST00000471862 MTRQ99707 1265 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 TLR9Q9NR96 1032 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 FAM105AQ9NUU6 356 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 PIN4Q9Y237 131 aaKnown RBP12.86□□□□□ -0.35
COL4A3-205ENST00000471862 LZTS1Q9Y250 596 aa12.86□□□□□ -0.35
COL4A3-205ENST00000471862 GLP2RO95838 553 aa12.85□□□□□ -0.35
COL4A3-205ENST00000471862 SPATA31C1P0DKV0 1188 aa12.85□□□□□ -0.35
COL4A3-205ENST00000471862 SKIP12755 728 aa12.85□□□□□ -0.35
COL4A3-205ENST00000471862 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
COL4A3-205ENST00000471862 MCM7P33993 719 aa12.85□□□□□ -0.35
COL4A3-205ENST00000471862 RARRES1P49788 294 aa12.85□□□□□ -0.35
COL4A3-205ENST00000471862 RABEP1Q15276 862 aa12.85□□□□□ -0.35
COL4A3-205ENST00000471862 TWF2Q6IBS0 349 aaKnown RBP12.85□□□□□ -0.35
COL4A3-205ENST00000471862 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
COL4A3-205ENST00000471862 THNSL1Q8IYQ7 743 aa12.85□□□□□ -0.35
COL4A3-205ENST00000471862 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms