RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TMEM40Q8WWA1 233 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 PLIN2Q99541 437 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 FDXACB1Q9BRP7 624 aaPredicted RBP16.76■□□□□ 0.27
SNX13-205ENST00000471744 ERVK-5Q9HDB9 667 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 CXXC1Q9P0U4 656 aaPredicted RBP16.76■□□□□ 0.27
SNX13-205ENST00000471744 KCNG1Q9UIX4 513 aa16.76■□□□□ 0.27
SNX13-205ENST00000471744 AMHP03971 560 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 SSBP05455 408 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNX13-205ENST00000471744 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
SNX13-205ENST00000471744 GUCY2CP25092 1073 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 SLC12A3P55017 1021 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 SMAD3P84022 425 aaKnown RBP16.75■□□□□ 0.27
SNX13-205ENST00000471744 AXDND1Q5T1B0 1012 aaPredicted RBP16.75■□□□□ 0.27
SNX13-205ENST00000471744 RINT1Q6NUQ1 792 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 C1orf186Q6ZWK4 172 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 USP49Q70CQ1 688 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 FAM228AQ86W67 206 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 IFNLR1Q8IU57 520 aaPredicted RBP16.75■□□□□ 0.27
SNX13-205ENST00000471744 LARP4BQ92615 738 aaKnown RBP16.75■□□□□ 0.27
SNX13-205ENST00000471744 RAD54LQ92698 747 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 IFT74Q96LB3 600 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 DRC1Q96MC2 740 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
SNX13-205ENST00000471744 NFKBIZQ9BYH8 718 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 C17orf75Q9HAS0 396 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 FAM13BQ9NYF5 915 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 PCDHA7Q9UN72 937 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 ST3GAL5Q9UNP4 418 aa16.75■□□□□ 0.27
SNX13-205ENST00000471744 PTPRSQ13332 1948 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 GLRA2P23416 452 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 STAT6P42226 847 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 NAMPTP43490 491 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 PTENP60484 403 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 MAEAQ7L5Y9 396 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 KSR1Q8IVT5 923 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 ASAP3Q8TDY4 903 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 ZNF668Q96K58 619 aaPredicted RBP16.74■□□□□ 0.27
SNX13-205ENST00000471744 RUSC1Q9BVN2 902 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 C2orf40Q9H1Z8 148 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
SNX13-205ENST00000471744 C1orf112Q9NSG2 853 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 BLOC1S4Q9NUP1 217 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 CHMP5Q9NZZ3 219 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
SNX13-205ENST00000471744 MYO9BQ13459 2157 aa16.74■□□□□ 0.27
SNX13-205ENST00000471744 GBF1Q92538 1859 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 ZSCAN20P17040 1043 aaPredicted RBP16.73■□□□□ 0.27
SNX13-205ENST00000471744 CAPSQ13938 189 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 TCTN1Q2MV58 587 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 ADALQ6DHV7 355 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 ZBTB8OSQ8IWT0 167 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 CUEDC2Q9H467 287 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 GPRC5CQ9NQ84 441 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 CHST12Q9NRB3 414 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 DACT1Q9NYF0 836 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 ODF2LQ9ULJ1 636 aa16.73■□□□□ 0.27
SNX13-205ENST00000471744 RANBP2P49792 3224 aaKnown RBP16.73■□□□□ 0.27
SNX13-205ENST00000471744 PHLPP2Q6ZVD8 1323 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 DENND3A2RUS2 1198 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 LRRIQ4A6NIV6 560 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 HIP1RO75146 1068 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 NCBP1Q09161 790 aaKnown RBP16.72■□□□□ 0.27
SNX13-205ENST00000471744 DMP1Q13316 513 aaPredicted RBP16.72■□□□□ 0.27
SNX13-205ENST00000471744 MCM6Q14566 821 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 RAB30Q15771 203 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 RESP18Q5W5W9 173 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 SHC4Q6S5L8 630 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 SV2BQ7L1I2 683 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 CATSPER4Q7RTX7 472 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 MYOCDQ8IZQ8 938 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 IQUBQ8NA54 791 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
SNX13-205ENST00000471744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.71■□□□□ 0.27
SNX13-205ENST00000471744 ENPP3O14638 875 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 ERLIN2O94905 339 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 STAG3L1P0CL83 205 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 AXLP30530 894 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 EFNA5P52803 228 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 CSPP1Q1MSJ5 1256 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 CDCA2Q69YH5 1023 aaPredicted RBP16.71■□□□□ 0.27
SNX13-205ENST00000471744 GPR153Q6NV75 609 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 HERC6Q8IVU3 1022 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 DEPTORQ8TB45 409 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
SNX13-205ENST00000471744 ADAM2Q99965 735 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 LRRC27Q9C0I9 530 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 TMX1Q9H3N1 280 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 MAGEF1Q9HAY2 307 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 RGS18Q9NS28 235 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 MSRAQ9UJ68 235 aa16.71■□□□□ 0.27
SNX13-205ENST00000471744 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 SLC34A2O95436 690 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
SNX13-205ENST00000471744 SCP2P22307 547 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 CMA1P23946 247 aa16.7■□□□□ 0.26
SNX13-205ENST00000471744 SMTNP53814 917 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms