RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 EPHA7Q15375 998 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 ELAVL1Q15717 326 aaKnown RBP5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 SMN1Q16637 294 aaKnown RBP5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 CFAP100Q494V2 611 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 FNDC7Q5VTL7 733 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 CDCA2Q69YH5 1023 aaPredicted RBP5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 BMP8AQ7Z5Y6 402 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 NKD2Q969F2 451 aaPredicted RBP5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 ARL8AQ96BM9 186 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 CLIP3Q96DZ5 547 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 SLC2A4RGQ9NR83 387 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 CEP72Q9P209 647 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 NCDNQ9UBB6 729 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 B4GALT6Q9UBX8 382 aa5.14□□□□□ -1.59
PRPF40A-207ENST00000471701 JUNP05412 331 aaKnown RBP5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 JMJD7P0C870 316 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 VSIG10L2P0DP72 767 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 PTX3P26022 381 aaPredicted RBP5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 SMAD3P84022 425 aaKnown RBP5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 BMS1Q14692 1282 aaKnown RBP5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 MAN2A1Q16706 1144 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 FKBP15Q5T1M5 1219 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 MFSD5Q6N075 450 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 PHYKPLQ8IUZ5 450 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 ZZZ3Q8IYH5 903 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 IKZF4Q9H2S9 585 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 IL23AQ9NPF7 189 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 POLR3BQ9NW08 1133 aaPredicted RBP5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 HECAQ9UBI9 543 aaPredicted RBP5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 DNAI1Q9UI46 699 aa5.13□□□□□ -1.59
PRPF40A-207ENST00000471701 GOLGA6L6A8MZA4 724 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 DNAJC8O75937 253 aaPredicted RBP5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 TOX4O94842 621 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 KIR2DL3P43628 341 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 SCNN1GP51170 649 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 NPEPPSP55786 919 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 CLEC14AQ86T13 490 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 PASD1Q8IV76 773 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 C7orf31Q8N865 590 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 LARP4BQ92615 738 aaKnown RBP5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 UIMC1Q96RL1 719 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 ELF4Q99607 663 aaPredicted RBP5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 GPR87Q9BY21 358 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 TOMM22Q9NS69 142 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 XDHP47989 1333 aa5.12□□□□□ -1.59
PRPF40A-207ENST00000471701 CBX4O00257 560 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 PRPF6O94906 941 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 FSBPO95073 299 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 ASMTLO95671 621 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 INHBEP58166 350 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 SQSTM1Q13501 440 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 ZNF460Q14592 562 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 Q6ZRM9 215 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 MRGPRGQ86SM5 289 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 CMTM4Q8IZR5 234 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 SH3TC2Q8TF17 1288 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 ATXN2LQ8WWM7 1075 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 PRRX2Q99811 253 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 ZSWIM4Q9H7M6 989 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 C14orf93Q9H972 538 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 SPO11Q9Y5K1 396 aa5.11□□□□□ -1.59
PRPF40A-207ENST00000471701 TMEM191CA6NGB0 347 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 PPP1R12AO14974 1030 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 GAS7O60861 476 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 RAMP2O60895 175 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 RPS6KA4O75676 772 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 RFPL3O75679 317 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 IPO13O94829 963 aaKnown RBP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 HNRNPLP14866 589 aaKnown RBP eCLIP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 SDSP20132 328 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 MYBPC3Q14896 1274 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 ELOA2Q8IYF1 753 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 ULK2Q8IYT8 1036 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 SREK1Q8WXA9 508 aaKnown RBP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 HAS1Q92839 578 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 HIST1H2AHQ96KK5 128 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 ZNF512Q96ME7 567 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 MNTQ99583 582 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 HIST1H2AJQ99878 128 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 NOL10Q9BSC4 688 aaKnown RBP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 MYL10Q9BUA6 226 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 OSBPL6Q9BZF3 934 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 EPC1Q9H2F5 836 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 OXSMQ9NWU1 459 aa5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 MAGEC2Q9UBF1 373 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-207ENST00000471701 A0A0A6YYJ9 748 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 GNAT2P19087 354 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 PTGS2P35354 604 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 NEK4P51957 841 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 ADAM8P78325 824 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 PABPC4Q13310 644 aaKnown RBP eCLIP5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 KIAA1841Q6NSI8 718 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 KANSL1Q7Z3B3 1105 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 KIF18BQ86Y91 864 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 SYNPOQ8N3V7 929 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 MTG2Q9H4K7 406 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 NRDE2Q9H7Z3 1164 aa5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 INTS7Q9NVH2 962 aaKnown RBP5.09□□□□□ -1.59
PRPF40A-207ENST00000471701 FAM20BO75063 409 aa5.08□□□□□ -1.6
PRPF40A-207ENST00000471701 PPFIA2O75334 1257 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms