RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 TRIM72Q6ZMU5 477 aa13.88□□□□□ -0.19
PCCB-210ENST00000471595 HEXIM2Q96MH2 286 aaKnown RBP13.88□□□□□ -0.19
PCCB-210ENST00000471595 THEGQ9P2T0 379 aa13.88□□□□□ -0.19
PCCB-210ENST00000471595 RASA4BC9J798 803 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 RASA4O43374 803 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 HVCN1Q96D96 273 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 RMDN3Q96TC7 470 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 IRX2Q9BZI1 471 aaPredicted RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 NOP53Q9NZM5 478 aaKnown RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 OATP04181 439 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 STAT3P40763 770 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 TFDP2Q14188 446 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 KLHL38Q2WGJ6 581 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 CFAP36Q96G28 342 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 GINM1Q9NU53 330 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 TLK1Q9UKI8 766 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 ZNF667Q5HYK9 610 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 RAB44Q7Z6P3 723 aaPredicted RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 TBC1D1Q86TI0 1168 aaPredicted RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 DNAAF3Q8N9W5 541 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 KLC2Q9H0B6 622 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 CYP2C19P33261 490 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 EPHA7Q15375 998 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 ANKRD20A4Q4UJ75 823 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 ANKRD20A8PQ5CZ79 823 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 ANKRD20A2Q5SQ80 823 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 ANKRD20A1Q5TYW2 823 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 SALL3Q9BXA9 1300 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 SLC16A4O15374 487 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 FOXP2O15409 715 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 STX1BP61266 288 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 BEND6Q5SZJ8 279 aaPredicted RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 EPM2AIP1Q7L775 607 aaPredicted RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 RNF169Q8NCN4 708 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 TRIM55Q9BYV6 548 aa13.87□□□□□ -0.19
PCCB-210ENST00000471595 DNAJC17Q9NVM6 304 aaKnown RBP13.87□□□□□ -0.19
PCCB-210ENST00000471595 MAP3K7O43318 606 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 SMARCA1P28370 1054 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 CACNB3P54284 484 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 CIAPIN1Q6FI81 312 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 APOL6Q9BWW8 343 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 TMEM60Q9H2L4 133 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 TBX3O15119 743 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 TOM1L1O75674 476 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 AKR1B1P15121 316 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 DPY19L2Q6NUT2 758 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 LRIG3Q6UXM1 1119 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 TRIM56Q9BRZ2 755 aaKnown RBP13.86□□□□□ -0.19
PCCB-210ENST00000471595 ZWILCHQ9H900 591 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 IP6K2Q9UHH9 426 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 CNTNAP5Q8WYK1 1306 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 AGLP35573 1532 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
PCCB-210ENST00000471595 TTC4O95801 387 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 FAM182BQ5T319 152 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 SCARA5Q6ZMJ2 495 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 BBS5Q8N3I7 341 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 SNF8Q96H20 258 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 LXNQ9BS40 222 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 NUB1Q9Y5A7 615 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 TECPR2O15040 1411 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 CLDN3O15551 220 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 GYPCP04921 128 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
PCCB-210ENST00000471595 TIPINQ9BVW5 301 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 LRRC4Q9HBW1 653 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 MTMR4Q9NYA4 1195 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 SCOCQ9UIL1 159 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 PSMC5P62195 406 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 ZNF211Q13398 564 aaPredicted RBP13.86□□□□□ -0.19
PCCB-210ENST00000471595 CCDC137Q6PK04 289 aaKnown RBP13.86□□□□□ -0.19
PCCB-210ENST00000471595 CCNI2Q6ZMN8 369 aaPredicted RBP13.86□□□□□ -0.19
PCCB-210ENST00000471595 SP8Q8IXZ3 490 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 FAF2Q96CS3 445 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 HDAC11Q96DB2 347 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 TRIM4Q9C037 500 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 FBXL5Q9UKA1 691 aa13.86□□□□□ -0.19
PCCB-210ENST00000471595 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
PCCB-210ENST00000471595 STXBP3O00186 592 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 MMP10P09238 476 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 EDRF1Q3B7T1 1238 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 DPP9Q86TI2 863 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 METTL23Q86XA0 190 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 CHMP6Q96FZ7 201 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 ASNSD1Q9NWL6 643 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 ECE2O60344 883 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 ARMCX2Q7L311 632 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 RSPH3Q86UC2 560 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 AGPAT1Q99943 283 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 TDRD3Q9H7E2 651 aaKnown RBP13.85□□□□□ -0.19
PCCB-210ENST00000471595 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
PCCB-210ENST00000471595 WDR91A4D1P6 747 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms