RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ST3GAL5Q9UNP4 418 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 NOC2LQ9Y3T9 749 aaKnown RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 NR2E1Q9Y466 385 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 SMCO2A6NFE2 343 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 C9IYK1 514 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 DDX39AO00148 427 aaKnown RBP10.34□□□□□ -0.75
CPSF4-211ENST00000471455 FSCN2O14926 492 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 MAGEB2O15479 319 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 ZBTB43O43298 467 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 ARP10275 920 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 ZSCAN20P17040 1043 aaPredicted RBP10.34□□□□□ -0.75
CPSF4-211ENST00000471455 TMOD1P28289 359 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 GGCXP38435 758 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 GATMP50440 423 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 RCAN1P53805 252 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 PLCB3Q01970 1234 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 PTPN21Q16825 1174 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 MSS51Q4VC12 460 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 CREB3L3Q68CJ9 461 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 ZNF746Q6NUN9 644 aaPredicted RBP10.34□□□□□ -0.75
CPSF4-211ENST00000471455 APOA5Q6Q788 366 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 ABHD15Q6UXT9 468 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 TMEM184AQ6ZMB5 413 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 PLA2G4DQ86XP0 818 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 RAB11FIP4Q86YS3 637 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 KIAA0319LQ8IZA0 1049 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 METTL13Q8N6R0 699 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 PRSS33Q8NF86 280 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 CYP2W1Q8TAV3 490 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 RASGRP4Q8TDF6 673 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 SUSD6Q92537 303 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 MRPS27Q92552 414 aaKnown RBP10.34□□□□□ -0.75
CPSF4-211ENST00000471455 CASP10Q92851 521 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 ZNF558Q96NG5 402 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 NECTIN4Q96NY8 510 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 TCF25Q9BQ70 676 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
CPSF4-211ENST00000471455 TMEM117Q9H0C3 514 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 ANO2Q9NQ90 1003 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 TBC1D22BQ9NU19 505 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 BARHL2Q9NY43 387 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 LOXHD1Q8IVV2 1947 aa10.34□□□□□ -0.75
CPSF4-211ENST00000471455 CCDC196A0A1B0GTZ2 297 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
CPSF4-211ENST00000471455 PER2O15055 1255 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 CCNE2O96020 404 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 PSAPP07602 524 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 TECP42680 631 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 KIZQ2M2Z5 673 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 PLPP4Q5VZY2 271 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 CES5AQ6NT32 575 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 SWSAP1Q6NVH7 229 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 ANKRD54Q6NXT1 300 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 CCDC60Q8IWA6 550 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-211ENST00000471455 PGBD1Q96JS3 809 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 YTHDC1Q96MU7 727 aaKnown RBP10.33□□□□□ -0.76
CPSF4-211ENST00000471455 OSMRQ99650 979 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 ESYT1Q9BSJ8 1104 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 ZNF577Q9BSK1 485 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 MRPL9Q9BYD2 267 aaKnown RBP10.33□□□□□ -0.76
CPSF4-211ENST00000471455 LRRC2Q9BYS8 371 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 TYW1Q9NV66 732 aaKnown RBP10.33□□□□□ -0.76
CPSF4-211ENST00000471455 FNDC1Q4ZHG4 1894 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-211ENST00000471455 PLXNA4Q9HCM2 1894 aa10.33□□□□□ -0.76
CPSF4-211ENST00000471455 GOLGA8AA7E2F4 631 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 GOLGA8BA8MQT2 603 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 MGEA5O60502 916 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 C22orf31O95567 290 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 CYP3A4P08684 503 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 FGFR1P11362 822 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 ERVFC1P60507 584 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 FAM189BP81408 668 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 FGD1P98174 961 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 ITIH3Q06033 890 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 MTMR3Q13615 1198 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 KRT32Q14532 448 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 SMC1AQ14683 1233 aaKnown RBP10.32□□□□□ -0.76
CPSF4-211ENST00000471455 FAM102BQ5T8I3 360 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 FAM228AQ86W67 206 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 UBALD2Q8IYN6 164 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 TMEM87AQ8NBN3 555 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 TMEM40Q8WWA1 233 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 SCLT1Q96NL6 688 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 C6orf50Q9HD87 102 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 DACT1Q9NYF0 836 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 SPG21Q9NZD8 308 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 AKT3Q9Y243 479 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 SAMM50Q9Y512 469 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 PCDHGC5Q9Y5F6 944 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 PCDHA10Q9Y5I2 948 aa10.32□□□□□ -0.76
CPSF4-211ENST00000471455 V9GY48 417 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-211ENST00000471455 ESYT2A0FGR8 921 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 WDR64B1ANS9 1081 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 HMGB1P09429 215 aaKnown RBP10.31□□□□□ -0.76
CPSF4-211ENST00000471455 NDUFV2P19404 249 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 GNA11P29992 359 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 CLK2P49760 499 aaKnown RBP10.31□□□□□ -0.76
CPSF4-211ENST00000471455 CDC42EP1Q00587 391 aa10.31□□□□□ -0.76
CPSF4-211ENST00000471455 NECTIN1Q15223 517 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms