RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ROM1Q03395 351 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 ZP2Q05996 745 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 IFIT5Q13325 482 aaKnown RBP8.22□□□□□ -1.09
SMC5-202ENST00000471372 OR14C36Q8NHC7 312 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 DPF2Q92785 391 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 DMRT3Q9NQL9 472 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 LMCD1Q9NZU5 365 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 USP18Q9UMW8 372 aa8.22□□□□□ -1.09
SMC5-202ENST00000471372 MORC2Q9Y6X9 1032 aaPredicted RBP8.22□□□□□ -1.09
SMC5-202ENST00000471372 RASA4BC9J798 803 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 RASA4O43374 803 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 PSPNO60542 156 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 PIK3CBP42338 1070 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 CACNB3P54284 484 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 CHRNEQ04844 493 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 POU5F1BQ06416 359 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 IL10RAQ13651 578 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 NOLC1Q14978 699 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMC5-202ENST00000471372 TUBB8Q3ZCM7 444 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 LMBR1LQ6UX01 489 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 KRT78Q8N1N4 520 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 LRTOMTQ8WZ04 291 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 KAT5Q92993 513 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 MTG2Q9H4K7 406 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 TRMT13Q9NUP7 481 aaKnown RBP8.21□□□□□ -1.1
SMC5-202ENST00000471372 EVLQ9UI08 416 aaPredicted RBP8.21□□□□□ -1.1
SMC5-202ENST00000471372 DENND2AQ9ULE3 1009 aa8.21□□□□□ -1.1
SMC5-202ENST00000471372 ZC3H12DA2A288 527 aaKnown RBP8.2□□□□□ -1.1
SMC5-202ENST00000471372 TYRP1P17643 537 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 PRIM2P49643 509 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 GALK1P51570 392 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 TRIM14Q14142 442 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 RSPO4Q2I0M5 234 aaPredicted RBP8.2□□□□□ -1.1
SMC5-202ENST00000471372 DAAM2Q86T65 1068 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 OXR1Q8N573 874 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 PDZD8Q8NEN9 1154 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 KLHDC4Q8TBB5 520 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 RIPOR3Q96MK2 946 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 NAP1L4Q99733 375 aaKnown RBP8.2□□□□□ -1.1
SMC5-202ENST00000471372 CRB3Q9BUF7 120 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 AMNQ9BXJ7 453 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 CASS4Q9NQ75 786 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
SMC5-202ENST00000471372 DBHP09172 617 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 CD8BP10966 210 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 PTGS1P23219 599 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 PPM1FP49593 454 aaPredicted RBP8.19□□□□□ -1.1
SMC5-202ENST00000471372 DSC2Q02487 901 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 TIGD5Q53EQ6 642 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 CD276Q5ZPR3 534 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 LRSAM1Q6UWE0 723 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 GAREM2Q75VX8 874 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 SPPL2CQ8IUH8 684 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 CPXCR1Q8N123 301 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 DEPTORQ8TB45 409 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 FATE1Q969F0 183 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 MISP3Q96FF7 219 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 NT5C1BQ96P26 610 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 SLC39A2Q9NP94 309 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 NGRNQ9NPE2 291 aaKnown RBP8.19□□□□□ -1.1
SMC5-202ENST00000471372 PRDM7Q9NQW5 492 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 ARHGAP28Q9P2N2 729 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 SCOCQ9UIL1 159 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 STXBP5LQ9Y2K9 1186 aa8.19□□□□□ -1.1
SMC5-202ENST00000471372 SCO2A0A1W2PP80 73 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 CFAP69A5D8W1 941 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 KPNA5O15131 536 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 WASP42768 502 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 MCAMP43121 646 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 MAP2K6P52564 334 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 MAEAQ7L5Y9 396 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 MYLK4Q86YV6 388 aaPredicted RBP8.18□□□□□ -1.1
SMC5-202ENST00000471372 SMAP1Q8IYB5 467 aaPredicted RBP8.18□□□□□ -1.1
SMC5-202ENST00000471372 OR2C3Q8N628 320 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 OR2I1PQ8NGU4 316 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 PLBD2Q8NHP8 589 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 BCL7CQ8WUZ0 217 aaPredicted RBP8.18□□□□□ -1.1
SMC5-202ENST00000471372 GAB3Q8WWW8 586 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 RSAD2Q8WXG1 361 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 HDAC10Q969S8 669 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 PEX11GQ96HA9 241 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 NUP62CLQ9H1M0 184 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 C19orf44Q9H6X5 657 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 NUDT5Q9UKK9 219 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 PCDHB6Q9Y5E3 794 aa8.18□□□□□ -1.1
SMC5-202ENST00000471372 FITM1A5D6W6 292 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 SRGAP3O43295 1099 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 MGEA5O60502 916 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 OPHN1O60890 802 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 FTLP02792 175 aaPredicted RBP8.17□□□□□ -1.1
SMC5-202ENST00000471372 GSPT1P15170 499 aaKnown RBP8.17□□□□□ -1.1
SMC5-202ENST00000471372 CD53P19397 219 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 ERVFC1P60507 584 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 PPP3CAQ08209 521 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 SNX17Q15036 470 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 MSMPQ1L6U9 139 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 MUM1L1Q5H9M0 696 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 NKAPLQ5M9Q1 402 aa8.17□□□□□ -1.1
SMC5-202ENST00000471372 KLHDC10Q6PID8 442 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms