RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 IQGAP3Q86VI3 1631 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 VPS8Q8N3P4 1428 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 GOLGA6CA6NDK9 693 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 GOLGA6BA6NDN3 693 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 RASSF10A6NK89 507 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 GOLGA8AA7E2F4 631 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 GOLGA8BA8MQT2 603 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 GOLGA6DP0CG33 693 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 GNALP38405 381 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 MOGSQ13724 837 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 NR1I3Q14994 352 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 MLC1Q15049 377 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 PDCD1Q15116 288 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 PGM2L1Q6PCE3 622 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 CCAR1Q8IX12 1150 aaKnown RBP7.3□□□□□ -1.24
CKS1B-204ENST00000471245 RBM12BQ8IXT5 1001 aaKnown RBP7.3□□□□□ -1.24
CKS1B-204ENST00000471245 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.3□□□□□ -1.24
CKS1B-204ENST00000471245 E2F7Q96AV8 911 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 TSPAN17Q96FV3 270 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 KIRREL1Q96J84 757 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 NUP88Q99567 741 aaPredicted RBP7.3□□□□□ -1.24
CKS1B-204ENST00000471245 CCM2LQ9NUG4 571 aaPredicted RBP7.3□□□□□ -1.24
CKS1B-204ENST00000471245 GOLGA6AQ9NYA3 693 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 MSRAQ9UJ68 235 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 TRPC5Q9UL62 973 aaPredicted RBP7.3□□□□□ -1.24
CKS1B-204ENST00000471245 ANKRD6Q9Y2G4 727 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 SIT1Q9Y3P8 196 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 ASB1Q9Y576 335 aa7.3□□□□□ -1.24
CKS1B-204ENST00000471245 PTCH1Q13635 1447 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 CT47B1P0C2W7 299 aaPredicted RBP7.29□□□□□ -1.24
CKS1B-204ENST00000471245 VCAM1P19320 739 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 TRHRP34981 398 aaPredicted RBP7.29□□□□□ -1.24
CKS1B-204ENST00000471245 FSCN1Q16658 493 aaKnown RBP7.29□□□□□ -1.24
CKS1B-204ENST00000471245 PAN2Q504Q3 1202 aaKnown RBP7.29□□□□□ -1.24
CKS1B-204ENST00000471245 CXorf67Q86X51 503 aaPredicted RBP7.29□□□□□ -1.24
CKS1B-204ENST00000471245 PHYKPLQ8IUZ5 450 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 CMIPQ8IY22 773 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 C7orf31Q8N865 590 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 TTC8Q8TAM2 541 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 ABHD4Q8TB40 342 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 ASB15Q8WXK1 588 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 RTF1Q92541 710 aaKnown RBP7.29□□□□□ -1.24
CKS1B-204ENST00000471245 WNT8AQ9H1J5 351 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 FAM53CQ9NYF3 392 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 HSPBP1Q9NZL4 362 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 YBX2Q9Y2T7 364 aaKnown RBP7.29□□□□□ -1.24
CKS1B-204ENST00000471245 ANKRD30AQ9BXX3 1397 aa7.29□□□□□ -1.24
CKS1B-204ENST00000471245 ADGRL3Q9HAR2 1447 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 ACOT7O00154 380 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 CAND2O75155 1236 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 H2AFYO75367 372 aaKnown RBP7.28□□□□□ -1.24
CKS1B-204ENST00000471245 GLI1P08151 1106 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 TMEM253P0C7T8 217 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 FAHP16930 419 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 ENPP1P22413 925 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 GFOD2Q3B7J2 385 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 ESPNLQ6ZVH7 1005 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 C14orf80Q86SX3 495 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 RTN4RL1Q86UN2 441 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-204ENST00000471245 ZSWIM9Q86XI8 627 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 CMTR2Q8IYT2 770 aaKnown RBP7.28□□□□□ -1.24
CKS1B-204ENST00000471245 ARRDC4Q8NCT1 418 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 FOXRED1Q96CU9 486 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-204ENST00000471245 ZNF496Q96IT1 587 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-204ENST00000471245 BCL9LQ86UU0 1499 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 GLI3P10071 1580 aa7.28□□□□□ -1.24
CKS1B-204ENST00000471245 BLMP54132 1417 aaPredicted RBP7.27□□□□□ -1.24
CKS1B-204ENST00000471245 UBA6A0AVT1 1052 aaPredicted RBP7.27□□□□□ -1.25
CKS1B-204ENST00000471245 ZC3H12DA2A288 527 aaKnown RBP7.27□□□□□ -1.25
CKS1B-204ENST00000471245 LCHNA4D1U4 455 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 KLHL33A6NCF5 533 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 F8W031 263 aaPredicted RBP7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PCDHGA12O60330 932 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 MPOP05164 745 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 MMEP08473 750 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PF4V1P10720 104 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 AOAHP28039 575 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 MANFP55145 182 aaKnown RBP7.27□□□□□ -1.25
CKS1B-204ENST00000471245 FYB2Q5VWT5 728 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 MIB1Q86YT6 1006 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 MAML3Q96JK9 1138 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 GBP4Q96PP9 640 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 RNF32Q9H0A6 362 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 DTLQ9NZJ0 730 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 KCNG1Q9UIX4 513 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 DBR1Q9UK59 544 aaKnown RBP7.27□□□□□ -1.25
CKS1B-204ENST00000471245 NOB1Q9ULX3 412 aaKnown RBP7.27□□□□□ -1.25
CKS1B-204ENST00000471245 INVSQ9Y283 1065 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PCDHGA9Q9Y5G4 932 aaKnown RBP7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PCDHGA8Q9Y5G5 932 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PCDHGA7Q9Y5G6 932 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PCDHGA6Q9Y5G7 932 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PCDHGA3Q9Y5H0 932 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 PCDHGA2Q9Y5H1 932 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 ADGRL2O95490 1459 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 C1orf167Q5SNV9 1468 aa7.27□□□□□ -1.25
CKS1B-204ENST00000471245 MYOM2P54296 1465 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.26□□□□□ -1.25
CKS1B-204ENST00000471245 XPOTO43592 962 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms