RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 B8ZZF3 427 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 EIF3JO75822 258 aaKnown RBP6.78□□□□□ -1.32
VARS-222ENST00000470953 NR3C2P08235 984 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 STAG3L1P0CL83 205 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 HOXC13P31276 330 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 CNR2P34972 360 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 CA8P35219 290 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 MPLP40238 635 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 ABCG1P45844 678 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
VARS-222ENST00000470953 TMEM62Q0P6H9 643 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 HTR4Q13639 388 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 TMEM266Q2M3C6 531 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 MARCH8Q5T0T0 291 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 HEATR6Q6AI08 1181 aaKnown RBP6.78□□□□□ -1.32
VARS-222ENST00000470953 GIMAP6Q6P9H5 292 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
VARS-222ENST00000470953 SLC22A17Q8WUG5 538 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 NANOS1Q8WY41 292 aaKnown RBP6.78□□□□□ -1.32
VARS-222ENST00000470953 OSBP2Q969R2 916 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 IWS1Q96ST2 819 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 TRIM4Q9C037 500 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 SEMA4CQ9C0C4 833 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 VPS45Q9NRW7 570 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 TOMM22Q9NS69 142 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 PADI3Q9ULW8 664 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 FLNCQ14315 2725 aa6.78□□□□□ -1.32
VARS-222ENST00000470953 NF1P21359 2839 aa6.77□□□□□ -1.32
VARS-222ENST00000470953 CSMD1Q96PZ7 3565 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 UTP20O75691 2785 aaKnown RBP6.77□□□□□ -1.33
VARS-222ENST00000470953 LNP1A1A4G5 178 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 ANHXE9PGG2 379 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 NEFLP07196 543 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 GNAT1P11488 350 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 MYCLP12524 364 aaPredicted RBP6.77□□□□□ -1.33
VARS-222ENST00000470953 ITPKBP27987 946 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 RAP1GAPP47736 663 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 SARSP49591 514 aaKnown RBP6.77□□□□□ -1.33
VARS-222ENST00000470953 NUCB1Q02818 461 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 SMC1AQ14683 1233 aaKnown RBP6.77□□□□□ -1.33
VARS-222ENST00000470953 PPP2R5DQ14738 602 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 UAP1L1Q3KQV9 507 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 ZMYM1Q5SVZ6 1142 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 UTP14CQ5TAP6 766 aaKnown RBP6.77□□□□□ -1.33
VARS-222ENST00000470953 ARHGEF16Q5VV41 709 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 TPRG1Q6ZUI0 275 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 CABP7Q86V35 215 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 LONP2Q86WA8 852 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 SMC5Q8IY18 1101 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 RGS22Q8NE09 1264 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 IL31RAQ8NI17 732 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 DCAF4Q8WV16 495 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 LOXL4Q96JB6 756 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 CHRDQ9H2X0 955 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 SFXN1Q9H9B4 322 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 MLXIPQ9HAP2 919 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 PXMP2Q9NR77 195 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 IL17BQ9UHF5 180 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
VARS-222ENST00000470953 DNMT3LQ9UJW3 386 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 PCDHB7Q9Y5E2 793 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 ZMYM2Q9UBW7 1377 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 KAT6AQ92794 2004 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 SPAG17Q6Q759 2223 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 DOCK5Q9H7D0 1870 aa6.77□□□□□ -1.33
VARS-222ENST00000470953 WDR19Q8NEZ3 1342 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 F5P12259 2224 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 MGAQ8IWI9 3026 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 TSPY2A6NKD2 308 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 PATL2C9JE40 543 aaKnown RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 H0Y626 953 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 HIP1O00291 1037 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 CDX4O14627 284 aaPredicted RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 OPLAHO14841 1288 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 NCAM2O15394 837 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 TRIM16O95361 564 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 CXCL14O95715 111 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 NOVP48745 357 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 CCR3P51677 355 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 MRPS6P82932 125 aaKnown RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 PPARAQ07869 468 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 LY6DQ14210 128 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 WTAPQ15007 396 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 RRP12Q5JTH9 1297 aaKnown RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 PPP4R3BQ5MIZ7 849 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 HIST2H2BCQ6DN03 193 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 KCNT2Q6UVM3 1135 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 RSPO2Q6UXX9 243 aaPredicted RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 CCNI2Q6ZMN8 369 aaPredicted RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 KBTBD6Q86V97 674 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 SCUBE3Q8IX30 993 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 UBE2Q2Q8WVN8 375 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 FCRL3Q96P31 734 aaPredicted RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 DCBLD2Q96PD2 775 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 SEC62Q99442 399 aaKnown RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 ARID3AQ99856 593 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 USP26Q9BXU7 913 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 FTHL17Q9BXU8 183 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 FAM49AQ9H0Q0 323 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms