RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-209	ENST00000470083	EIF4B	P23588	611 aa	Known RBP	13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	STARD6	P59095	220 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	ITGB3BP	Q13352	177 aa	Predicted RBP	13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	WTAP	Q15007	396 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	UBE2S	Q16763	222 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	CWC27	Q6UX04	472 aa	Known RBP	13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	ZNF710	Q8N1W2	664 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	METTL13	Q8N6R0	699 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	ZBTB44	Q8NCP5	570 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	SHD	Q96IW2	340 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	MYADM	Q96S97	322 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	MXRA8	Q9BRK3	442 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	VN1R3	Q9BXE9	311 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	BCO2	Q9BYV7	579 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	ADAMTS10	Q9H324	1103 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	STK39	Q9UEW8	545 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	RALY	Q9UKM9	306 aa	Known RBP	13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	USP18	Q9UMW8	372 aa		13.66	□□□□□ -0.22
LSM2-209	ENST00000470083	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	ERICH2	A1L162	156 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	ANHX	E9PGG2	379 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	LRRN2	O75325	713 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	CCNE2	O96020	404 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	GALT	P07902	379 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	SMARCA1	P28370	1054 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	NLRP11	P59045	1033 aa	Known RBP	13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	PPM1J	Q5JR12	505 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	PDXDC2P	Q6P474	469 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	ABHD15	Q6UXT9	468 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	CATIP	Q7Z7H3	387 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	AGO4	Q9HCK5	861 aa	Known RBP	13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	MAN1C1	Q9NR34	630 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	ZSCAN32	Q9NX65	697 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	DACT1	Q9NYF0	836 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	PCDHA6	Q9UN73	950 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	PCDHA8	Q9Y5H6	950 aa		13.65	□□□□□ -0.22
LSM2-209	ENST00000470083	FASN	P49327	2511 aa	Known RBP	13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	CCDC195	A0A1B0GUA6	201 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	LILRB3	O75022	631 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	LILRB5	O75023	590 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	CLCN3	P51790	818 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	CSTF1	Q05048	431 aa	Known RBP	13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	TRDN	Q13061	729 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	HTR4	Q13639	388 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	ELMSAN1	Q6PJG2	1045 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	NELL1	Q92832	810 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	MAP7D2	Q96T17	732 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	MAP3K14	Q99558	947 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	NRDE2	Q9H7Z3	1164 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	PARD6A	Q9NPB6	346 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	ZNF302	Q9NR11	478 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	DIAPH3	Q9NSV4	1193 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	TBC1D13	Q9NVG8	400 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	DPP7	Q9UHL4	492 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	AKT3	Q9Y243	479 aa		13.64	□□□□□ -0.23
LSM2-209	ENST00000470083	ASPM	Q8IZT6	3477 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	KANSL1L	A0AUZ9	987 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	SLC30A4	O14863	429 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	INPPL1	O15357	1258 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	TBC1D4	O60343	1298 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	LAMP2	P13473	410 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	DARS	P14868	501 aa	Known RBP	13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	ATP4A	P20648	1035 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	KIF5B	P33176	963 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	DMWD	Q09019	674 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	SART3	Q15020	963 aa	Known RBP	13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	CEP55	Q53EZ4	464 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	GLB1L	Q6UWU2	654 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	NETO1	Q8TDF5	533 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	BBX	Q8WY36	941 aa	Predicted RBP	13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	DDX23	Q9BUQ8	820 aa	Known RBP	13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	MRPL17	Q9NRX2	175 aa	Known RBP	13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	GMEB2	Q9UKD1	530 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	NUMBL	Q9Y6R0	609 aa		13.63	□□□□□ -0.23
LSM2-209	ENST00000470083	CEP295	Q9C0D2	2601 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	MAGEB2	O15479	319 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	PAPLN	O95428	1278 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	SSB	P05455	408 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	ADH1A	P07327	375 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	TMOD1	P28289	359 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	MAGEA9	P43362	315 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	PHKA2	P46019	1235 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	SLC11A1	P49279	550 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	RNASEL	Q05823	741 aa	Known RBP	13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	NOMO2	Q5JPE7	1267 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	SWSAP1	Q6NVH7	229 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	MIS18BP1	Q6P0N0	1132 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	CKAP2L	Q8IYA6	745 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	LINC01465	Q8N7H1	131 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	CTCFL	Q8NI51	663 aa	Predicted RBP	13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	SMG7	Q92540	1137 aa	Known RBP	13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	ZNF707	Q96C28	371 aa	Predicted RBP	13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	LZTS2	Q9BRK4	669 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	TRAIP	Q9BWF2	469 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	OSBPL6	Q9BZF3	934 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	CEP131	Q9UPN4	1083 aa		13.62	□□□□□ -0.23
LSM2-209	ENST00000470083	FRY	Q5TBA9	3013 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms