RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 IQCF3P0C7M6 154 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 RAG1P15918 1043 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 NME8Q8N427 588 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 CNNM3Q8NE01 707 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 TET1Q8NFU7 2136 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 GPT2Q8TD30 523 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 FDXACB1Q9BRP7 624 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-209ENST00000469852 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
COL9A3-209ENST00000469852 MAGEF1Q9HAY2 307 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 DACT1Q9NYF0 836 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 USP25Q9UHP3 1055 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 TRPV2Q9Y5S1 764 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 ADGRA3Q8IWK6 1321 aa16.38■□□□□ 0.21
COL9A3-209ENST00000469852 NBNO60934 754 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 CAND2O75155 1236 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 SRGAP2CP0DJJ0 459 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 ZNF131P52739 623 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 MDM2Q00987 491 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-209ENST00000469852 TCTN1Q2MV58 587 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 NLRP7Q8WX94 980 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 KIFAP3Q92845 792 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 ERCC4Q92889 916 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-209ENST00000469852 BADQ92934 168 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 C7orf25Q9BPX7 421 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 TIPINQ9BVW5 301 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 MINDY3Q9H8M7 445 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 IFT122Q9HBG6 1241 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
COL9A3-209ENST00000469852 GOLGA6L22H0YM25 854 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 GHRP10912 638 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 CSF2RAP15509 400 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 FGFR4P22455 802 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 PEX3P56589 373 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 MXD4Q14582 209 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-209ENST00000469852 LPIN1Q14693 890 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 FBXO47Q5MNV8 452 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 RNF149Q8NC42 400 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 DRC1Q96MC2 740 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 FIZ1Q96SL8 496 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 ZHX3Q9H4I2 956 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 AGO3Q9H9G7 860 aaKnown RBP16.36■□□□□ 0.21
COL9A3-209ENST00000469852 PRKAG2Q9UGJ0 569 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 NR2E3Q9Y5X4 410 aa16.36■□□□□ 0.21
COL9A3-209ENST00000469852 FRMD3A2A2Y4 597 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 LRRIQ4A6NIV6 560 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 GTPBP6O43824 516 aaPredicted RBP16.35■□□□□ 0.21
COL9A3-209ENST00000469852 KLRC4O43908 158 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 TBCAO75347 108 aaKnown RBP16.35■□□□□ 0.21
COL9A3-209ENST00000469852 FAM13AO94988 1023 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 PLS3P13797 630 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 IDEP14735 1019 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 NPTX2P47972 431 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 CRYBB1P53674 252 aaPredicted RBP16.35■□□□□ 0.21
COL9A3-209ENST00000469852 ASIC1P78348 528 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 PNOCQ13519 176 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 MFSD5Q6N075 450 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 CNNM4Q6P4Q7 775 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 ZNF410Q86VK4 478 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 SFR1Q86XK3 245 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 TIGD1Q96MW7 591 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 SCLT1Q96NL6 688 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 FGFBP2Q9BYJ0 223 aa16.35■□□□□ 0.21
COL9A3-209ENST00000469852 NOC2LQ9Y3T9 749 aaKnown RBP16.35■□□□□ 0.21
COL9A3-209ENST00000469852 M0QZ92 97 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 ASAP2O43150 1006 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
COL9A3-209ENST00000469852 EDN1P05305 212 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 RPLP2P05387 115 aaKnown RBP16.34■□□□□ 0.21
COL9A3-209ENST00000469852 DARSP14868 501 aaKnown RBP16.34■□□□□ 0.21
COL9A3-209ENST00000469852 NAMPTP43490 491 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 EPHB4P54760 987 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 PTENP60484 403 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 AMPD3Q01432 767 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 DPYDQ12882 1025 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 POSTNQ15063 836 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 CDCA2Q69YH5 1023 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-209ENST00000469852 DEFB128Q7Z7B8 93 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 FAM228AQ86W67 206 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 MYCT1Q8N699 235 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 PARVGQ9HBI0 331 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 PANK4Q9NVE7 773 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 TBC1D7Q9P0N9 293 aa16.34■□□□□ 0.21
COL9A3-209ENST00000469852 CCDC169A6NNP5 214 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 SLC16A4O15374 487 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 EIF4BP23588 611 aaKnown RBP16.33■□□□□ 0.2
COL9A3-209ENST00000469852 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.2
COL9A3-209ENST00000469852 CD52P31358 61 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 MBTD1Q05BQ5 628 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 EHHADHQ08426 723 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 COASYQ13057 564 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 DMP1Q13316 513 aaPredicted RBP16.33■□□□□ 0.2
COL9A3-209ENST00000469852 TFDP1Q14186 410 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 ODR4Q5SWX8 454 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 C16orf59Q7L2K0 433 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 TAS1R3Q7RTX0 852 aa16.33■□□□□ 0.2
COL9A3-209ENST00000469852 IFNLR1Q8IU57 520 aaPredicted RBP16.33■□□□□ 0.2
COL9A3-209ENST00000469852 GLIS3Q8NEA6 775 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms