RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 DACT1Q9NYF0 836 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 TCEAL9Q9UHQ7 104 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 FBXL21Q9UKT6 434 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 DUSP12Q9UNI6 340 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 PCDHA10Q9Y5I2 948 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 EVPLQ92817 2033 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 hCG_1984214I3L0E3 225 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 CYP3A4P08684 503 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 JAKMIP3Q5VZ66 844 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 PPFIBP1Q86W92 1011 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 SIX5Q8N196 739 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 ZNF713Q8N859 430 aaPredicted RBP20.65■□□□□ 0.9
TTC28-205ENST00000469670 IGSF21Q96ID5 467 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 SCLT1Q96NL6 688 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 SFXN1Q9H9B4 322 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 KCNK12Q9HB15 430 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 BARHL2Q9NY43 387 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 V9GY48 417 aaPredicted RBP20.65■□□□□ 0.9
TTC28-205ENST00000469670 CACNA1AO00555 2505 aa20.65■□□□□ 0.9
TTC28-205ENST00000469670 CARNS1A5YM72 827 aa20.64■□□□□ 0.89
TTC28-205ENST00000469670 SLC27A2O14975 620 aa20.64■□□□□ 0.89
TTC28-205ENST00000469670 FUT2Q10981 343 aa20.64■□□□□ 0.89
TTC28-205ENST00000469670 KCNG4Q8TDN1 519 aa20.64■□□□□ 0.89
TTC28-205ENST00000469670 CRYGNQ8WXF5 182 aa20.64■□□□□ 0.89
TTC28-205ENST00000469670 SPDYE4A6NLX3 237 aa20.63■□□□□ 0.89
TTC28-205ENST00000469670 SETQ01105 290 aaPredicted RBP20.63■□□□□ 0.89
TTC28-205ENST00000469670 BCL7CQ8WUZ0 217 aaPredicted RBP20.63■□□□□ 0.89
TTC28-205ENST00000469670 NLRP7Q8WX94 980 aa20.63■□□□□ 0.89
TTC28-205ENST00000469670 RSPH1Q8WYR4 309 aa20.63■□□□□ 0.89
TTC28-205ENST00000469670 NRDE2Q9H7Z3 1164 aa20.63■□□□□ 0.89
TTC28-205ENST00000469670 SAMM50Q9Y512 469 aa20.63■□□□□ 0.89
TTC28-205ENST00000469670 CSDE1O75534 798 aaKnown RBP20.62■□□□□ 0.89
TTC28-205ENST00000469670 LMNAP02545 664 aaKnown RBP20.62■□□□□ 0.89
TTC28-205ENST00000469670 OATP04181 439 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 GALTP07902 379 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 PHKA2P46019 1235 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 PTPN14Q15678 1187 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 RTN1Q16799 776 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 APOA5Q6Q788 366 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 RMDN1Q96DB5 314 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
TTC28-205ENST00000469670 SEMA4AQ9H3S1 761 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 CHST12Q9NRB3 414 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 NRBP2Q9NSY0 501 aa20.62■□□□□ 0.89
TTC28-205ENST00000469670 ZNF862O60290 1169 aa20.61■□□□□ 0.89
TTC28-205ENST00000469670 LONRF3Q496Y0 759 aa20.61■□□□□ 0.89
TTC28-205ENST00000469670 LPPQ93052 612 aa20.61■□□□□ 0.89
TTC28-205ENST00000469670 TBC1D13Q9NVG8 400 aa20.61■□□□□ 0.89
TTC28-205ENST00000469670 IGSF9Q9P2J2 1179 aa20.61■□□□□ 0.89
TTC28-205ENST00000469670 MED19A0JLT2 244 aaPredicted RBP20.6■□□□□ 0.89
TTC28-205ENST00000469670 WDR64B1ANS9 1081 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 STK25O00506 426 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 NARSO43776 548 aaKnown RBP20.6■□□□□ 0.89
TTC28-205ENST00000469670 KLRC2P26717 231 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 CLCN4P51793 760 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 PRKCEQ02156 737 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 RNASELQ05823 741 aaKnown RBP20.6■□□□□ 0.89
TTC28-205ENST00000469670 LETM2Q2VYF4 491 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 NOMO2Q5JPE7 1267 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 CREB3L3Q68CJ9 461 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 GLB1LQ6UWU2 654 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 KLHL5Q96PQ7 755 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 TRAIPQ9BWF2 469 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 VN1R3Q9BXE9 311 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 EMILIN2Q9BXX0 1053 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 GCOM2Q9BZD3 368 aaPredicted RBP20.6■□□□□ 0.89
TTC28-205ENST00000469670 INPP5FQ9Y2H2 1132 aa20.6■□□□□ 0.89
TTC28-205ENST00000469670 ZNF292O60281 2723 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 DENND4AQ7Z401 1863 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 ZBTB43O43298 467 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 CFHP08603 1231 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 SKIP12755 728 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 SLC11A1P49279 550 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 TBC1D8BQ0IIM8 1120 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 PRR16Q569H4 304 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 TWF2Q6IBS0 349 aaKnown RBP20.59■□□□□ 0.89
TTC28-205ENST00000469670 C15orf39Q6ZRI6 1047 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 DGLUCYQ7Z3D6 616 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 GBP3Q9H0R5 595 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 DISC1Q9NRI5 854 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 WNT16Q9UBV4 365 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 DNAJB4Q9UDY4 337 aa20.59■□□□□ 0.89
TTC28-205ENST00000469670 KRBA1A5PL33 1030 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 MEIS3P2A8K0S8 358 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 SSBP05455 408 aaKnown RBP eCLIP20.58■□□□□ 0.89
TTC28-205ENST00000469670 CNPP09543 421 aaKnown RBP20.58■□□□□ 0.89
TTC28-205ENST00000469670 DRP2Q13474 957 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 NECTIN1Q15223 517 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 KIAA2013Q8IYS2 634 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 STK39Q9UEW8 545 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 BRPF3Q9ULD4 1205 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 R4GN57 208 aa20.58■□□□□ 0.89
TTC28-205ENST00000469670 EP300Q09472 2414 aaPredicted RBP20.58■□□□□ 0.88
TTC28-205ENST00000469670 ADAMTS3O15072 1205 aa20.57■□□□□ 0.88
TTC28-205ENST00000469670 N4BP1O75113 896 aaKnown RBP20.57■□□□□ 0.88
TTC28-205ENST00000469670 OFD1O75665 1012 aa20.57■□□□□ 0.88
TTC28-205ENST00000469670 RFX1P22670 979 aa20.57■□□□□ 0.88
TTC28-205ENST00000469670 SFPQP23246 707 aaKnown RBP eCLIP20.57■□□□□ 0.88
TTC28-205ENST00000469670 CDC42EP1Q00587 391 aa20.57■□□□□ 0.88
TTC28-205ENST00000469670 UGCGQ16739 394 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms