RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 MYO10Q9HD67 2058 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 IGKV6-21A0A0C4DH24 114 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 NT5C1B-RDH14C9J2C7 533 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 CXCL14O95715 111 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 RPS6KB1P23443 525 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 AVPR2P30518 371 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 ALDH7A1P49419 539 aaKnown RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 BCAR1P56945 870 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 NLRP5P59047 1200 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 Q4G0T1 1027 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 LRCH2Q5VUJ6 765 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 B3GNT9Q6UX72 402 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 CASP10Q92851 521 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 TRAIPQ9BWF2 469 aa13.8□□□□□ -0.2
COL5A1-207ENST00000469093 GCOM2Q9BZD3 368 aaPredicted RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 NCOA5Q9HCD5 579 aaKnown RBP13.8□□□□□ -0.2
COL5A1-207ENST00000469093 PTPRZ1P23471 2315 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-207ENST00000469093 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 A0A087WZ62 844 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 TMEM150BA6NC51 233 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 CYP3A7P24462 503 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 PHKA2P46019 1235 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 MTERF2Q49AM1 385 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 TPRNQ4KMQ1 711 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 XKR3Q5GH77 459 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 CES5AQ6NT32 575 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 RDM1Q8NG50 284 aa13.79□□□□□ -0.2
COL5A1-207ENST00000469093 FDXACB1Q9BRP7 624 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-207ENST00000469093 M0R2N6 131 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 TDP2O95551 362 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 PSMA5P28066 241 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 ITIH3Q06033 890 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 MIER3Q7Z3K6 550 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 TMEM173Q86WV6 379 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-207ENST00000469093 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 NECTIN4Q96NY8 510 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 MRPL9Q9BYD2 267 aaKnown RBP13.78□□□□□ -0.2
COL5A1-207ENST00000469093 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 SEPT9Q9UHD8 586 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-207ENST00000469093 PCDHA4Q9UN74 947 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 NR2E1Q9Y466 385 aa13.78□□□□□ -0.2
COL5A1-207ENST00000469093 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 C2CD4DB7Z1M9 353 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 PDGFBP01127 241 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-207ENST00000469093 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-207ENST00000469093 WEE2P0C1S8 567 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 DNM2P50570 870 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 BMS1Q14692 1282 aaKnown RBP13.77□□□□□ -0.21
COL5A1-207ENST00000469093 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 WDR81Q562E7 1941 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 KANK3Q6NY19 840 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 ZBTB33Q86T24 672 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 DDX53Q86TM3 631 aaKnown RBP13.77□□□□□ -0.21
COL5A1-207ENST00000469093 KSR1Q8IVT5 923 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 C12orf76Q8N812 135 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-207ENST00000469093 KREMEN2Q8NCW0 462 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 LPPQ93052 612 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 TMEM169Q96HH4 297 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 MBOAT7Q96N66 472 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 INO80BQ9C086 356 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-207ENST00000469093 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 SUCLA2Q9P2R7 463 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-207ENST00000469093 IRAK3Q9Y616 596 aa13.77□□□□□ -0.21
COL5A1-207ENST00000469093 MEIS3P2A8K0S8 358 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 ZNF623O75123 536 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 ZC3H11AO75152 810 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL5A1-207ENST00000469093 MAFO75444 373 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-207ENST00000469093 OFD1O75665 1012 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 GALTP07902 379 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 CTSAP10619 480 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 SKIP12755 728 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL5A1-207ENST00000469093 SSRP1Q08945 709 aaKnown RBP13.76□□□□□ -0.21
COL5A1-207ENST00000469093 TOB2Q14106 344 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-207ENST00000469093 NPY5RQ15761 445 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 TWF2Q6IBS0 349 aaKnown RBP13.76□□□□□ -0.21
COL5A1-207ENST00000469093 ANO5Q75V66 913 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 ZNF410Q86VK4 478 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 RHPN2Q8IUC4 686 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 TRIM22Q8IYM9 498 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 ETNPPLQ8TBG4 499 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 SLC22A17Q8WUG5 538 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 AUTS2Q8WXX7 1259 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 RSPH1Q8WYR4 309 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 IGSF21Q96ID5 467 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 ZBP1Q9H171 429 aa13.76□□□□□ -0.21
COL5A1-207ENST00000469093 FAM105AQ9NUU6 356 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms