RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 NOLC1Q14978 699 aaKnown RBP eCLIP20.8■□□□□ 0.924e-16■■■■■ 30.2
SMC4-209ENST00000468653 DUSP28Q4G0W2 176 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 AFG1LQ8WV93 481 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 SOCS4Q8WXH5 440 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 BAG1Q99933 345 aaPredicted RBP20.8■□□□□ 0.92
SMC4-209ENST00000468653 TRPC6Q9Y210 931 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 ALDH1A1P00352 501 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 SMPD1P17405 629 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 TRIM21P19474 475 aaKnown RBP20.8■□□□□ 0.92
SMC4-209ENST00000468653 CYP2B6P20813 491 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 CLCN1P35523 988 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 SNRPFP62306 86 aaKnown RBP20.8■□□□□ 0.92
SMC4-209ENST00000468653 PPP2R3AQ06190 1150 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 MYBPC2Q14324 1141 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 PPP2R5AQ15172 486 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 SLC9A9Q8IVB4 645 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 EXOC8Q8IYI6 725 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 FAM186BQ8IYM0 893 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 RETREG2Q8NC44 543 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 USP6NLQ92738 828 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 CCDC51Q96ER9 411 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 MKNK1Q9BUB5 465 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 DMAC2Q9NW81 257 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 ERAP1Q9NZ08 941 aa20.8■□□□□ 0.92
SMC4-209ENST00000468653 HBP1O60381 514 aa20.79■□□□□ 0.92
SMC4-209ENST00000468653 MAFO75444 373 aaPredicted RBP20.79■□□□□ 0.92
SMC4-209ENST00000468653 XRCC5P13010 732 aaKnown RBP20.79■□□□□ 0.92
SMC4-209ENST00000468653 ABCD1P33897 745 aa20.79■□□□□ 0.92
SMC4-209ENST00000468653 ARL2P36404 184 aa20.79■□□□□ 0.92
SMC4-209ENST00000468653 KLK7P49862 253 aa20.79■□□□□ 0.92
SMC4-209ENST00000468653 NOGQ13253 232 aa20.79■□□□□ 0.92
SMC4-209ENST00000468653 OR6J1Q8NGC5 347 aa20.79■□□□□ 0.92
SMC4-209ENST00000468653 EXOC3O60645 756 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 LGALS2P05162 132 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 KRT9P35527 623 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 TNFAIP2Q03169 654 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 KCNH2Q12809 1159 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 PRAMEF19Q5SWL8 479 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 MAP4K3Q8IVH8 894 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 APBA2Q99767 749 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 MMRN2Q9H8L6 949 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 FLRT1Q9NZU1 646 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 LUC7L2Q9Y383 392 aaKnown RBP20.78■□□□□ 0.92
SMC4-209ENST00000468653 DOCK3Q8IZD9 2030 aa20.78■□□□□ 0.92
SMC4-209ENST00000468653 TTC26A0AVF1 554 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 STX10O60499 249 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 PPFIA4O75335 1185 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 GLRA2P23416 452 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 NAMPTP43490 491 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 DCAF17Q5H9S7 520 aaPredicted RBP20.77■□□□□ 0.92
SMC4-209ENST00000468653 TCERG1LQ5VWI1 586 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 C12orf56Q8IXR9 622 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 DEPTORQ8TB45 409 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 ASAP3Q8TDY4 903 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 IQCDQ96DY2 449 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 GJD2Q9UKL4 321 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 CAPN11Q9UMQ6 739 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 SIK3Q9Y2K2 1263 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 ADGRA3Q8IWK6 1321 aa20.77■□□□□ 0.92
SMC4-209ENST00000468653 LRRIQ4A6NIV6 560 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 TISP43B9A030 160 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 GAS2O43903 313 aaKnown RBP20.77■□□□□ 0.91
SMC4-209ENST00000468653 IRF5Q13568 498 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 CCL14Q16627 93 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 OLFML2BQ68BL8 750 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 TMEM139Q8IV31 216 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 TCP11Q8WWU5 503 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 JPH2Q9BR39 696 aaPredicted RBP20.77■□□□□ 0.91
SMC4-209ENST00000468653 PCIF1Q9H4Z3 704 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 SUGCTQ9HAC7 445 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 SPTLC3Q9NUV7 552 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 ARHGAP28Q9P2N2 729 aa20.77■□□□□ 0.91
SMC4-209ENST00000468653 RASSF10A6NK89 507 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 RNF225M0QZC1 329 aaPredicted RBP20.76■□□□□ 0.91
SMC4-209ENST00000468653 ARHGAP6O43182 974 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 AFPP02771 609 aaKnown RBP20.76■□□□□ 0.91
SMC4-209ENST00000468653 SCP2P22307 547 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 CYP2C19P33261 490 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 FIGNQ5HY92 759 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 IER5Q5VY09 327 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 CCDC155Q8N6L0 562 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 BORCS6Q96GS4 357 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 CBWD1Q9BRT8 395 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 NAA15Q9BXJ9 866 aaKnown RBP20.76■□□□□ 0.91
SMC4-209ENST00000468653 RNPEPQ9H4A4 650 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 FAM207AQ9NSI2 230 aaPredicted RBP20.76■□□□□ 0.91
SMC4-209ENST00000468653 ABHD10Q9NUJ1 306 aa20.76■□□□□ 0.91
SMC4-209ENST00000468653 ZBTB42B2RXF5 422 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 AOC2O75106 756 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 KCNJ6P48051 423 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 FCGRTP55899 365 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 STRN3Q13033 797 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 TSR1Q2NL82 804 aaKnown RBP20.75■□□□□ 0.91
SMC4-209ENST00000468653 ZNF397Q8NF99 534 aaPredicted RBP20.75■□□□□ 0.91
SMC4-209ENST00000468653 TMEM174Q8WUU8 243 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 BICD1Q96G01 975 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 CAPNS2Q96L46 248 aa20.75■□□□□ 0.91
SMC4-209ENST00000468653 ZNF215Q9UL58 517 aaPredicted RBP20.75■□□□□ 0.91
SMC4-209ENST00000468653 ZNF286BP0CG31 522 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms