RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 HDAC6Q9UBN7 1215 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 GABBR1Q9UBS5 961 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 LRWD1Q9UFC0 647 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 PRKAG2Q9UGJ0 569 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 KCNG1Q9UIX4 513 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 TUBE1Q9UJT0 475 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 DBR1Q9UK59 544 aaKnown RBP3.94□□□□□ -1.78
TRIM59-202ENST00000468542 SAMM50Q9Y512 469 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 PCDHA2Q9Y5H9 948 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 SRPRBQ9Y5M8 271 aaKnown RBP3.94□□□□□ -1.78
TRIM59-202ENST00000468542 SQORQ9Y6N5 450 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 WASF2Q9Y6W5 498 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 MYH11P35749 1972 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 COL6A3P12111 3177 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 TTC3P53804 2025 aa3.94□□□□□ -1.78
TRIM59-202ENST00000468542 PRUNE2Q8WUY3 3088 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 DDX39AO00148 427 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CHMP2AO43633 222 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 PQBP1O60828 265 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 DTNBO60941 627 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 EFCAB14O75071 495 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 MAFO75444 373 aaPredicted RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 C22orf31O95567 290 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TIMP1P01033 207 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CXCL10P02778 98 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 INSRRP14616 1297 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 SELPP16109 830 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 NDUFV2P19404 249 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 ATP4AP20648 1035 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 PTGS1P23219 599 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TMOD1P28289 359 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 SSTR3P32745 418 aaPredicted RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 BMP8BP34820 402 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TXLNAP40222 546 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TECP42680 631 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 RARRES1P49788 294 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 GSK3AP49840 483 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 PSMC6P62333 389 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 KRT85P78386 507 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 SP4Q02446 784 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TBC1D8BQ0IIM8 1120 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 MXD4Q14582 209 aaPredicted RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TRIM71Q2Q1W2 868 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 ODR4Q5SWX8 454 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 MARCH8Q5T0T0 291 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 UTP14CQ5TAP6 766 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 PRPF38BQ5VTL8 546 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 IER5Q5VY09 327 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 NCAPH2Q6IBW4 605 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 GDF6Q6KF10 455 aaPredicted RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 MFSD5Q6N075 450 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CLEC17AQ6ZS10 378 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 ANO5Q75V66 913 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 FERMT3Q86UX7 667 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CATSPER3Q86XQ3 398 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CKAP2LQ8IYA6 745 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TMEM199Q8N511 208 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 LINC01465Q8N7H1 131 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 KRI1Q8N9T8 703 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 RETREG2Q8NC44 543 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 MCPH1Q8NEM0 835 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 RSPH1Q8WYR4 309 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 BAP1Q92560 729 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 DPF3Q92784 378 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 NACC1Q96RE7 527 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 USP28Q96RU2 1077 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CEP89Q96ST8 783 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 EIF2AK1Q9BQI3 630 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 NFKBIZQ9BYH8 718 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 HIPK3Q9H422 1215 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CUEDC2Q9H467 287 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 DHX33Q9H6R0 707 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 C17orf75Q9HAS0 396 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 MAGEF1Q9HAY2 307 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 CYP26B1Q9NR63 512 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TRMT13Q9NUP7 481 aaKnown RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TMEM39AQ9NV64 488 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 SETD4Q9NVD3 440 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 FBXO2Q9UK22 296 aaPredicted RBP3.93□□□□□ -1.78
TRIM59-202ENST00000468542 RCOR1Q9UKL0 485 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 NOD1Q9Y239 953 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 ATP11BQ9Y2G3 1177 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 ZDHHC9Q9Y397 364 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 TELO2Q9Y4R8 837 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 PHLPP2Q6ZVD8 1323 aa3.93□□□□□ -1.78
TRIM59-202ENST00000468542 RALGAPA2Q2PPJ7 1873 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 EYSQ5T1H1 3165 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 FAM237AA0A1B0GTK4 181 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 A0A1W2PQ27 194 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 A0A1W2PQ64 194 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 A0A1W2PQD8 194 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 VWA3AA6NCI4 1184 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 TRIM43BA6NCK2 446 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 M0QZ92 97 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 SPTLC2O15270 562 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 ASAP2O43150 1006 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 TREHO43280 583 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 CUTAO60888 179 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 BAIAP3O94812 1187 aa3.92□□□□□ -1.78
TRIM59-202ENST00000468542 EYA4O95677 639 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms