RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 KRT32Q14532 448 aa14.76□□□□□ -0.05
PTPN7-207ENST00000468385 TARBP2Q15633 366 aaKnown RBP14.76□□□□□ -0.05
PTPN7-207ENST00000468385 BMP2KLQ5H9B9 411 aa14.76□□□□□ -0.05
PTPN7-207ENST00000468385 TMEM173Q86WV6 379 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-207ENST00000468385 C12orf76Q8N812 135 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-207ENST00000468385 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
PTPN7-207ENST00000468385 TMEM169Q96HH4 297 aa14.76□□□□□ -0.05
PTPN7-207ENST00000468385 ZBP1Q9H171 429 aa14.76□□□□□ -0.05
PTPN7-207ENST00000468385 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
PTPN7-207ENST00000468385 CHMP2AO43633 222 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
PTPN7-207ENST00000468385 CA8P35219 290 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 PHKA2P46019 1235 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 ALDH7A1P49419 539 aaKnown RBP14.75□□□□□ -0.05
PTPN7-207ENST00000468385 TBC1D8BQ0IIM8 1120 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 RARS2Q5T160 578 aaKnown RBP14.75□□□□□ -0.05
PTPN7-207ENST00000468385 KIAA1841Q6NSI8 718 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 KANK3Q6NY19 840 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 Q6ZUG5 572 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 SKAP1Q86WV1 359 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 VPS52Q8N1B4 723 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 TMEM105Q8N8V8 129 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 AUTS2Q8WXX7 1259 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 SLC5A5Q92911 643 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 PHKBQ93100 1093 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 GJA10Q969M2 543 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 CCDC136Q96JN2 1154 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 SCLT1Q96NL6 688 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 CEP89Q96ST8 783 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 RIT2Q99578 217 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 UNC45AQ9H3U1 944 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 CHST12Q9NRB3 414 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 IRAK3Q9Y616 596 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 PLXNA3P51805 1871 aa14.75□□□□□ -0.05
PTPN7-207ENST00000468385 CFAP54Q96N23 3096 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 IGKV6-21A0A0C4DH24 114 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.74□□□□□ -0.05
PTPN7-207ENST00000468385 PROB1E7EW31 1015 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 GAS7O60861 476 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTPN7-207ENST00000468385 STBD1O95210 358 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 ASGR2P07307 311 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 EPCAMP16422 314 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 SFNP31947 248 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 JAK3P52333 1124 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 FGD1P98174 961 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 BMS1Q14692 1282 aaKnown RBP14.74□□□□□ -0.05
PTPN7-207ENST00000468385 NTRK3Q16288 839 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 ZDHHC14Q8IZN3 488 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 FEZF2Q8TBJ5 459 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 BICD2Q8TD16 824 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 BCL7CQ8WUZ0 217 aaPredicted RBP14.74□□□□□ -0.05
PTPN7-207ENST00000468385 BRF1Q92994 677 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 LPPQ93052 612 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 TRAIPQ9BWF2 469 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 TEKT3Q9BXF9 490 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 NIFKQ9BYG3 293 aaKnown RBP14.74□□□□□ -0.05
PTPN7-207ENST00000468385 GCOM2Q9BZD3 368 aaPredicted RBP14.74□□□□□ -0.05
PTPN7-207ENST00000468385 DZANK1Q9NVP4 752 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 CACNA1HO95180 2353 aa14.74□□□□□ -0.05
PTPN7-207ENST00000468385 A0A087WZ62 844 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 TMEM150BA6NC51 233 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 MEIS3P2A8K0S8 358 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 GALTP07902 379 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 CTSAP10619 480 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 USP11P51784 963 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 MTERF2Q49AM1 385 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 ATAT1Q5SQI0 421 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 LRCH2Q5VUJ6 765 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 B3GNT9Q6UX72 402 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 DDX53Q86TM3 631 aaKnown RBP14.73□□□□□ -0.05
PTPN7-207ENST00000468385 TDRD5Q8NAT2 981 aaKnown RBP14.73□□□□□ -0.05
PTPN7-207ENST00000468385 CCDC148Q8NFR7 591 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 SLC22A17Q8WUG5 538 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 RSPH1Q8WYR4 309 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 KCNB2Q92953 911 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 IGSF21Q96ID5 467 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 SH2D3AQ9BRG2 576 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 FDXACB1Q9BRP7 624 aaPredicted RBP14.73□□□□□ -0.05
PTPN7-207ENST00000468385 RNF26Q9BY78 433 aaPredicted RBP14.73□□□□□ -0.05
PTPN7-207ENST00000468385 NRDE2Q9H7Z3 1164 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 TBC1D13Q9NVG8 400 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 VPS54Q9P1Q0 977 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 SEPT9Q9UHD8 586 aaPredicted RBP14.73□□□□□ -0.05
PTPN7-207ENST00000468385 DBR1Q9UK59 544 aaKnown RBP14.73□□□□□ -0.05
PTPN7-207ENST00000468385 USTQ9Y2C2 406 aa14.73□□□□□ -0.05
PTPN7-207ENST00000468385 MYO10Q9HD67 2058 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 PSMD10O75832 226 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 POLGP54098 1239 aaPredicted RBP14.72□□□□□ -0.05
PTPN7-207ENST00000468385 CDC42EP1Q00587 391 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 AKAP17AQ02040 695 aaKnown RBP14.72□□□□□ -0.05
PTPN7-207ENST00000468385 GIT2Q14161 759 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 LONRF3Q496Y0 759 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 XKR3Q5GH77 459 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 TWF2Q6IBS0 349 aaKnown RBP14.72□□□□□ -0.05
PTPN7-207ENST00000468385 ASCL5Q7RTU5 278 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 MIER3Q7Z3K6 550 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 FBXL16Q8N461 479 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 RDM1Q8NG50 284 aa14.72□□□□□ -0.05
PTPN7-207ENST00000468385 VN1R3Q9BXE9 311 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms