RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 CEP63Q96MT8 703 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 ABHD16BQ9H3Z7 469 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 TCEAL9Q9UHQ7 104 aa9.09□□□□□ -0.95
BRCA1-208ENST00000468300 SLC16A4O15374 487 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 DKC1O60832 514 aaKnown RBP eCLIP9.08□□□□□ -0.96
BRCA1-208ENST00000468300 GYPCP04921 128 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 PEX3P56589 373 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 SPAG1Q07617 926 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 EMC2Q15006 297 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 TAF3Q5VWG9 929 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 PPP4R3CPQ6ZMV5 832 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 ZNF662Q6ZS27 426 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 ZSCAN30Q86W11 494 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 TRIM59Q8IWR1 403 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 LENG1Q96BZ8 264 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-208ENST00000468300 CAPNS2Q96L46 248 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 DRC1Q96MC2 740 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 TTYH3Q9C0H2 523 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 GABRQQ9UN88 632 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 ESPNB1AK53 854 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 MAFO75444 373 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-208ENST00000468300 GLRA2P23416 452 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 PAX3P23760 479 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 ADSSP30520 456 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 CYP2C19P33261 490 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 LACTBP83111 547 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-208ENST00000468300 ADAM9Q13443 819 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 LAMC2Q13753 1193 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 HAUS6Q7Z4H7 955 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 DRC7Q8IY82 874 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 CCDC155Q8N6L0 562 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 LINC01465Q8N7H1 131 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 AFG1LQ8WV93 481 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 SPIRE2Q8WWL2 714 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 TMEM143Q96AN5 459 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 CFHR5Q9BXR6 569 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 ATP6V0A4Q9HBG4 840 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 AGPAT3Q9NRZ7 376 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 ARHGAP28Q9P2N2 729 aa9.08□□□□□ -0.96
BRCA1-208ENST00000468300 CLIC2O15247 247 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 GH1P01241 217 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 NR3C1P04150 777 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 LGALS2P05162 132 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 SCP2P22307 547 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 MARK3P27448 753 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 APLP1P51693 650 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 IRF5Q13568 498 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 DEFB115Q30KQ5 88 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 IQSEC1Q6DN90 963 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 ATP8B4Q8TF62 1192 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 SIK3Q9Y2K2 1263 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 K7ENM7 598 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 N4BP3O15049 544 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 MMP3P08254 477 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 NR2F2P24468 414 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 FXR1P51114 621 aaKnown RBP eCLIP9.07□□□□□ -0.96
BRCA1-208ENST00000468300 RBL2Q08999 1139 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 NOGQ13253 232 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 GRM1Q13255 1194 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 VWA3BQ502W6 1294 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 FAM160B1Q5W0V3 765 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 ZNF280DQ6N043 979 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 C17orf53Q8N3J3 647 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-208ENST00000468300 RNF217Q8TC41 542 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 TRAPPC12Q8WVT3 735 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 KIFAP3Q92845 792 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 APBA2Q99767 749 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 POLR3FQ9H1D9 316 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-208ENST00000468300 C17orf75Q9HAS0 396 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 LARSQ9P2J5 1176 aaKnown RBP9.07□□□□□ -0.96
BRCA1-208ENST00000468300 A0A1W2PQC6 194 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 ANKRD63C9JTQ0 380 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 EPHB6O15197 1021 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 TBC1D8O95759 1140 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 ZNF286BP0CG31 522 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 CYP2B6P20813 491 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 MARCH8Q5T0T0 291 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 MCPH1Q8NEM0 835 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 KIAA1524Q8TCG1 905 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 TSG101Q99816 390 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 TBX20Q9UMR3 447 aa9.07□□□□□ -0.96
BRCA1-208ENST00000468300 EVPLQ92817 2033 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 RBAK-RBAKDNI3L0D1 243 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 FECHP22830 423 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 ADKP55263 362 aaKnown RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 HTRA3P83110 453 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 UBXN1Q04323 297 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 HIC1Q14526 733 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 MAP4K3Q8IVH8 894 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 C12orf56Q8IXR9 622 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 TRIB2Q92519 343 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 ERGIC2Q96RQ1 377 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 HAPLN2Q9GZV7 340 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 NDST4Q9H3R1 872 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 SMARCAD1Q9H4L7 1026 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 A6NJR5 290 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 TTLL13PA6NNM8 815 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms