RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-206ENST00000468179 FDXACB1Q9BRP7 624 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-206ENST00000468179 SIP14410 1827 aa16.29■□□□□ 0.2
COMMD3-206ENST00000468179 RBAK-RBAKDNI3L0D1 243 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 WNT7AO00755 349 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 EOMESO95936 686 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 MUTP22033 750 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 GJB2P29033 226 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 TFDP1Q14186 410 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 PCBP1Q15365 356 aaKnown RBP eCLIP16.28■□□□□ 0.2
COMMD3-206ENST00000468179 CSPP1Q1MSJ5 1256 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 SPOUT1Q5T280 376 aaKnown RBP16.28■□□□□ 0.2
COMMD3-206ENST00000468179 HAUS3Q68CZ6 603 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 PRPF31Q8WWY3 499 aaKnown RBP16.28■□□□□ 0.2
COMMD3-206ENST00000468179 HLA-CQ95604 372 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 DCBLD2Q96PD2 775 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 ASB2Q96Q27 587 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 NACC1Q96RE7 527 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-206ENST00000468179 TTC3P53804 2025 aa16.28■□□□□ 0.2
COMMD3-206ENST00000468179 EVPLQ92817 2033 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 A0A0U1RQF3 1178 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 POTEMA6NI47 508 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 TBKBP1A7MCY6 615 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 NCBP1Q09161 790 aaKnown RBP16.27■□□□□ 0.2
COMMD3-206ENST00000468179 LAMTOR4Q0VGL1 99 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 PDIA5Q14554 519 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 PAN2Q504Q3 1202 aaKnown RBP16.27■□□□□ 0.2
COMMD3-206ENST00000468179 RILPL1Q5EBL4 403 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 CATSPER4Q7RTX7 472 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 FERMT3Q86UX7 667 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 ECHDC2Q86YB7 292 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 TMEM143Q96AN5 459 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 TRAIPQ9BWF2 469 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 PCDHB12Q9Y5F1 795 aa16.27■□□□□ 0.2
COMMD3-206ENST00000468179 MRPL42Q9Y6G3 142 aaKnown RBP16.27■□□□□ 0.2
COMMD3-206ENST00000468179 MYO9BQ13459 2157 aa16.27■□□□□ 0.19
COMMD3-206ENST00000468179 NCK2O43639 380 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 SRGAP2CP0DJJ0 459 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 RPA1P27694 616 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 PHKA2P46019 1235 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 RARRES1P49788 294 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 RAB27AP51159 221 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 TWF2Q6IBS0 349 aaKnown RBP16.26■□□□□ 0.19
COMMD3-206ENST00000468179 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 PPP2R3CQ969Q6 453 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 PRDM6Q9NQX0 595 aa16.26■□□□□ 0.19
COMMD3-206ENST00000468179 DBR1Q9UK59 544 aaKnown RBP16.26■□□□□ 0.19
COMMD3-206ENST00000468179 PIN4Q9Y237 131 aaKnown RBP16.26■□□□□ 0.19
COMMD3-206ENST00000468179 CARNS1A5YM72 827 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 ZBTB39O15060 712 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
COMMD3-206ENST00000468179 LINC00271P0C7V0 271 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 SPATA31C1P0DKV0 1188 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 FGFR4P22455 802 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 PRPHP41219 470 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 PTGDRQ13258 359 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 FAM102BQ5T8I3 360 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
COMMD3-206ENST00000468179 KSR1Q8IVT5 923 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 RNF149Q8NC42 400 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 MCPH1Q8NEM0 835 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 PIGOQ8TEQ8 1089 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 NSUN3Q9H649 340 aaKnown RBP16.25■□□□□ 0.19
COMMD3-206ENST00000468179 IFT122Q9HBG6 1241 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 BMP2KQ9NSY1 1161 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-206ENST00000468179 LRWD1Q9UFC0 647 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 WDR81Q562E7 1941 aa16.25■□□□□ 0.19
COMMD3-206ENST00000468179 CSDE1O75534 798 aaKnown RBP16.24■□□□□ 0.19
COMMD3-206ENST00000468179 ERLIN2O94905 339 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 FGFR1P11362 822 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 LAG3P18627 525 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 PDCP20941 246 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 AXLP30530 894 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 DTHD1Q6ZMT9 781 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 LRRC43Q8N309 656 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 RNF169Q8NCN4 708 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 PGBD4Q96DM1 585 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 PHF12Q96QT6 1004 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 MRPL9Q9BYD2 267 aaKnown RBP16.24■□□□□ 0.19
COMMD3-206ENST00000468179 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
COMMD3-206ENST00000468179 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 MED24O75448 989 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 CCT6AP40227 531 aaKnown RBP16.23■□□□□ 0.19
COMMD3-206ENST00000468179 GATMP50440 423 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 TOB1P50616 345 aaPredicted RBP16.23■□□□□ 0.19
COMMD3-206ENST00000468179 UBE3AQ05086 875 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 CASD1Q96PB1 797 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 COL25A1Q9BXS0 654 aaPredicted RBP16.23■□□□□ 0.19
COMMD3-206ENST00000468179 XPNPEP1Q9NQW7 623 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 AGPAT5Q9NUQ2 364 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
COMMD3-206ENST00000468179 PCDHB6Q9Y5E3 794 aa16.23■□□□□ 0.19
COMMD3-206ENST00000468179 GRM6O15303 877 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 USO1O60763 962 aaKnown RBP16.22■□□□□ 0.19
COMMD3-206ENST00000468179 ZNF623O75123 536 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms