RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 UTP14CQ5TAP6 766 aaKnown RBP11.14□□□□□ -0.63
MSH5-213ENST00000468136 SFMBT2Q5VUG0 894 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 SLFN12LQ6IEE8 588 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 MAMDC4Q6UXC1 1216 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 RAD9BQ6WBX8 426 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 TMEM161BQ8NDZ6 487 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 SLC35C1Q96A29 364 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 EMID1Q96A84 441 aaPredicted RBP11.14□□□□□ -0.63
MSH5-213ENST00000468136 PORCNQ9H237 461 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 TMEM134Q9H6X4 195 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 ZNF408Q9H9D4 720 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 AIPL1Q9NZN9 384 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 TBX20Q9UMR3 447 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 USP20Q9Y2K6 914 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 KIAA1217Q5T5P2 1943 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 GSTTP1A0A1W2PQM5 241 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 RASSF10A6NK89 507 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 CCDC169A6NNP5 214 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 ASAP2O43150 1006 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 HBP1O60381 514 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 LDHAP00338 332 aaKnown RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 PIGRP01833 764 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 SERPING1P05155 500 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 EFNA5P52803 228 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 NPEPPSP55786 919 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 SP2Q02086 613 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 KCNMA1Q12791 1236 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 BFSP1Q12934 665 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 STRN3Q13033 797 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 MXD4Q14582 209 aaPredicted RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 EMC2Q15006 297 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 TARBP2Q15633 366 aaKnown RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 ZC2HC1CQ53FD0 456 aaPredicted RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 TCERG1LQ5VWI1 586 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 IER5Q5VY09 327 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 CCDC62Q6P9F0 684 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 WDR59Q6PJI9 974 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 TOGARAM2Q6ZUX3 1019 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 VPS36Q86VN1 386 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 DHX37Q8IY37 1157 aaKnown RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 ATP8B4Q8TF62 1192 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 BRI3BPQ8WY22 251 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 BAP1Q92560 729 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 EEF2KMTQ96G04 330 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 LSM14BQ9BX40 385 aaKnown RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 DEF6Q9H4E7 631 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 L2HGDHQ9H9P8 463 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 NHEJ1Q9H9Q4 299 aaPredicted RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 FAM207AQ9NSI2 230 aaPredicted RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 AGPAT5Q9NUQ2 364 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
MSH5-213ENST00000468136 ARHGAP28Q9P2N2 729 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 MYH11P35749 1972 aa11.13□□□□□ -0.63
MSH5-213ENST00000468136 LCTP09848 1927 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 DENND3A2RUS2 1198 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 SOCS7O14512 581 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 CLIC2O15247 247 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 MAFO75444 373 aaPredicted RBP11.12□□□□□ -0.63
MSH5-213ENST00000468136 GH1P01241 217 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 CASQ1P31415 396 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
MSH5-213ENST00000468136 ARL2P36404 184 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 FMO5P49326 533 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 GOLGA8FQ08AF8 430 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 GOLGA8DPQ0D2H9 430 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 GRB14Q14449 540 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 DCAF17Q5H9S7 520 aaPredicted RBP11.12□□□□□ -0.63
MSH5-213ENST00000468136 WDR78Q5VTH9 848 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 KLHDC7AQ5VTJ3 777 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 PLA2G4FQ68DD2 849 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 TRIM65Q6PJ69 517 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 ILDR2Q71H61 639 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 RRAGAQ7L523 313 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 PLEKHH3Q7Z736 793 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 UBE2Q2Q8WVN8 375 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 FGD4Q96M96 766 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 FBXL18Q96ME1 805 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 SPAG5Q96R06 1193 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 GPR20Q99678 358 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 POLR3FQ9H1D9 316 aaPredicted RBP11.12□□□□□ -0.63
MSH5-213ENST00000468136 C2orf40Q9H1Z8 148 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 HSPBP1Q9NZL4 362 aa11.12□□□□□ -0.63
MSH5-213ENST00000468136 MYH9P35579 1960 aaKnown RBP11.11□□□□□ -0.63
MSH5-213ENST00000468136 RBAK-RBAKDNI3L0D1 243 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 RNF225M0QZC1 329 aaPredicted RBP11.11□□□□□ -0.63
MSH5-213ENST00000468136 SLC16A4O15374 487 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 MAGEB2O15479 319 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 TXNP10599 105 aaKnown RBP11.11□□□□□ -0.63
MSH5-213ENST00000468136 UCHL3P15374 230 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 FERP16591 822 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 PON1P27169 355 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 ADORA2AP29274 412 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 CNGA1P29973 690 aa11.11□□□□□ -0.63
MSH5-213ENST00000468136 PRKCIP41743 596 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms