RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 SMAD2Q15796 467 aaKnown RBP16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 RHPN2Q8IUC4 686 aa16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 THNSL1Q8IYQ7 743 aa16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 EFHBQ8N7U6 833 aa16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 FAM20AQ96MK3 541 aa16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 CYP26B1Q9NR63 512 aa16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 BMP2KQ9NSY1 1161 aaPredicted RBP16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 BARX2Q9UMQ3 279 aaPredicted RBP16.57■□□□□ 0.24
ATPAF2-204ENST00000467560 MEIS3P2A8K0S8 358 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 GCFC2P16383 781 aaKnown RBP16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 NDUFV1P49821 464 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 NEK4P51957 841 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 LONRF3Q496Y0 759 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 ZNF710Q8N1W2 664 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 HELQQ8TDG4 1101 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 LPPQ93052 612 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 LXNQ9BS40 222 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 GCOM2Q9BZD3 368 aaPredicted RBP16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 IFT122Q9HBG6 1241 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 TLR9Q9NR96 1032 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 CD207Q9UJ71 328 aa16.56■□□□□ 0.24
ATPAF2-204ENST00000467560 HIDE1A8MVS5 230 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 BTBD18B2RXH4 712 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 P4HBP07237 508 aaKnown RBP16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 XBP1P17861 261 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 LAG3P18627 525 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 KRT2P35908 639 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 CYP4A11Q02928 519 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 UBE3AQ05086 875 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 SMAD4Q13485 552 aaKnown RBP16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 EPHA7Q15375 998 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 TMEM31Q5JXX7 168 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 KCNT2Q6UVM3 1135 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 ADHFE1Q8IWW8 467 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 LRRC43Q8N309 656 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 MICAL1Q8TDZ2 1067 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 TMEM143Q96AN5 459 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 DYDC2Q96IM9 177 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 TLE6Q9H808 572 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 MINDY3Q9H8M7 445 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 AAASQ9NRG9 546 aa16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
ATPAF2-204ENST00000467560 TBX3O15119 743 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 GPR37L1O60883 481 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 EYA4O95677 639 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 PHKA2P46019 1235 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 DNM2P50570 870 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 PLCB3Q01970 1234 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 PLPP4Q5VZY2 271 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 CEP170P1Q96L14 293 aa16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 DHX33Q9H6R0 707 aaKnown RBP16.54■□□□□ 0.24
ATPAF2-204ENST00000467560 NT5C1B-RDH14C9J2C7 533 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 HOXA2O43364 376 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 B4GALT3O60512 393 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 SLITRK3O94933 977 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 YWHABP31946 246 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 COASYQ13057 564 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 KCNC3Q14003 757 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 DUSP6Q16828 381 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 ZNF410Q86VK4 478 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 TMEM173Q86WV6 379 aaPredicted RBP16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 C4orf19Q8IY42 314 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 DIS3L2Q8IYB7 885 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 ABI1Q8IZP0 508 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 SLC39A11Q8N1S5 342 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 SMRP1Q8NCR6 262 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 PRPF31Q8WWY3 499 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 WASF1Q92558 559 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 TCF25Q9BQ70 676 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 CHST12Q9NRB3 414 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 PRKAG3Q9UGI9 489 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 PIN4Q9Y237 131 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 MUC6Q6W4X9 2439 aa16.53■□□□□ 0.24
ATPAF2-204ENST00000467560 A0A087WWV3 80 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 EOMESO95936 686 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 SRGAP2CP0DJJ0 459 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 AFF1P51825 1210 aaKnown RBP16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 POLGP54098 1239 aaPredicted RBP16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 CDC42EP1Q00587 391 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 LAMTOR4Q0VGL1 99 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 TWF2Q6IBS0 349 aaKnown RBP16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 CATSPER4Q7RTX7 472 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 PPP2R3CQ969Q6 453 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 HSD17B14Q9BPX1 270 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 TRAIPQ9BWF2 469 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 XPNPEP1Q9NQW7 623 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 DACT1Q9NYF0 836 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 FAM50BQ9Y247 325 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 LZTS1Q9Y250 596 aa16.52■□□□□ 0.24
ATPAF2-204ENST00000467560 MARCH6O60337 910 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 HOXA11P31270 313 aaPredicted RBP16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
ATPAF2-204ENST00000467560 EMC2Q15006 297 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms