RNA–Protein interactions for RNA: ENST00000466290.1

SKIV2L-205, Transcript of Ski2 like RNA helicase, human

TSL 3

Gene SKIV2L, Length 583 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-205	ENST00000466290	PTEN	P60484	403 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	CEBPZ	Q03701	1054 aa	Known RBP	11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	NCBP1	Q09161	790 aa	Known RBP	11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	GRB10	Q13322	594 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TMEM119	Q4V9L6	283 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	FAM228A	Q86W67	206 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	MYOCD	Q8IZQ8	938 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PLCD3	Q8N3E9	789 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SYT2	Q8N9I0	419 aa	Predicted RBP	11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RNF149	Q8NC42	400 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RASSF8	Q8NHQ8	419 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TMEM40	Q8WWA1	233 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RSPH1	Q8WYR4	309 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TOP1MT	Q969P6	601 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TMEM143	Q96AN5	459 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	IFT74	Q96LB3	600 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	NLRP4	Q96MN2	994 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RAD9A	Q99638	391 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ZBED2	Q9BTP6	218 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	CSRNP2	Q9H175	543 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	GRPEL1	Q9HAV7	217 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	IFT122	Q9HBG6	1241 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	INSL6	Q9Y581	213 aa		11.18	□□□□□ -0.62
SKIV2L-205	ENST00000466290	LOXHD1	Q8IVV2	1947 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	DENND3	A2RUS2	1198 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290		E9PMD0	336 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TLL1	O43897	1013 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SKI	P12755	728 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SCP2	P22307	547 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	GUCY2C	P25092	1073 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	AXL	P30530	894 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	NAMPT	P43490	491 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	KRT85	P78386	507 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PKP1	Q13835	747 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ZRSR1	Q15695	479 aa	Known RBP	11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TCTN1	Q2MV58	587 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	CCDC73	Q6ZRK6	1079 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SLC24A5	Q71RS6	500 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	NPAS4	Q8IUM7	802 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TIFA	Q96CG3	184 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	DRC1	Q96MC2	740 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PNMA5	Q96PV4	448 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TRAIP	Q9BWF2	469 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PBX4	Q9BYU1	374 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	OSBPL7	Q9BZF2	842 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	C2orf40	Q9H1Z8	148 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ELAC1	Q9H777	363 aa	Known RBP	11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SLC28A3	Q9HAS3	691 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RGS18	Q9NS28	235 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TFIP11	Q9UBB9	837 aa	Known RBP	11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	STK17A	Q9UEE5	414 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RCOR1	Q9UKL0	485 aa		11.17	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SOX1	O00570	391 aa	Predicted RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	CUTA	O60888	179 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PLA2G4B	P0C869	781 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SRGAP2C	P0DJJ0	459 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	GLRA2	P23416	452 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	CLCN1	P35523	988 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SARS	P49591	514 aa	Known RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	EFNA5	P52803	228 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	FAM189B	P81408	668 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	DEFB103A	P81534	67 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	HTRA4	P83105	476 aa	Predicted RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	DSC3	Q14574	896 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	FAM102B	Q5T8I3	360 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ZNF697	Q5TEC3	545 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RINT1	Q6NUQ1	792 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	C1orf186	Q6ZWK4	172 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	CATSPER4	Q7RTX7	472 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ZBTB8OS	Q8IWT0	167 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ANP32B	Q92688	251 aa	Known RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SYMPK	Q92797	1274 aa	Known RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TRIM44	Q96DX7	344 aa	Predicted RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	CCDC51	Q96ER9	411 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	LRCH3	Q96II8	777 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PRIMPOL	Q96LW4	560 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PPP1R16B	Q96T49	567 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ADAM2	Q99965	735 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PYM1	Q9BRP8	204 aa	Known RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	GZF1	Q9H116	711 aa	Predicted RBP	11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TMX1	Q9H3N1	280 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	MICAL3	Q7RTP6	2002 aa		11.16	□□□□□ -0.62
SKIV2L-205	ENST00000466290	TTC3	P53804	2025 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	LAMA2	P24043	3122 aa	Known RBP	11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290		A0A087WWV3	80 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	GRXCR1	A8MXD5	290 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290		C9IYK1	514 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	HOXA2	O43364	376 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ERLIN2	O94905	339 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	EOMES	O95936	686 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	PLCG1	P19174	1290 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	ABCD1	P33897	745 aa		11.15	□□□□□ -0.62
SKIV2L-205	ENST00000466290	RAB27A	P51159	221 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms