RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ATRNL1Q5VV63 1379 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 FGGP02679 453 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 CAP2P40123 477 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 NPEPPSP55786 919 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 CEP85LQ5SZL2 805 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 ARHGAP27Q6ZUM4 889 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 UBLCP1Q8WVY7 318 aaPredicted RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 FAM84AQ96KN4 292 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 THAP2Q9H0W7 228 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 TMOD4Q9NZQ9 345 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 RNF14Q9UBS8 474 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 BRWD3Q6RI45 1802 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 SOX10P56693 466 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 TRAF1Q13077 416 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 PPFIA1Q13136 1202 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 MKRN4PQ13434 485 aaPredicted RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 ZNF572Q7Z3I7 529 aaPredicted RBP17.76■□□□□ 0.43
SLX4-202ENST00000466154 KAT5Q92993 513 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 ARHGEF26Q96DR7 871 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 TMEM51Q9NW97 253 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 AMFRQ9UKV5 643 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
SLX4-202ENST00000466154 MYO1CO00159 1063 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 EIF3DO15371 548 aaKnown RBP eCLIP17.75■□□□□ 0.43
SLX4-202ENST00000466154 ATMINO43313 823 aaPredicted RBP17.75■□□□□ 0.43
SLX4-202ENST00000466154 ERVK-9P63128 1117 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 BFSP1Q12934 665 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 MUM1L1Q5H9M0 696 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 PHLDB3Q6NSJ2 640 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 BCAS4Q8TDM0 211 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 SAAL1Q96ER3 474 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 LARSQ9P2J5 1176 aaKnown RBP17.75■□□□□ 0.43
SLX4-202ENST00000466154 TTI1O43156 1089 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 JAM2P57087 298 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 GLE1Q53GS7 698 aaKnown RBP17.75■□□□□ 0.43
SLX4-202ENST00000466154 AADACL2Q6P093 401 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 DAW1Q8N136 415 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 CTTNBP2NLQ9P2B4 639 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 APEX2Q9UBZ4 518 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 PPP1R9AQ9ULJ8 1098 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 FRMPD4Q14CM0 1322 aa17.75■□□□□ 0.43
SLX4-202ENST00000466154 DAPK3O43293 454 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 SLC26A4O43511 780 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 NPM3O75607 178 aaKnown RBP17.74■□□□□ 0.43
SLX4-202ENST00000466154 MTMR1Q13613 665 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 C10orf76Q5T2E6 689 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 PPM1KQ8N3J5 372 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 FIZ1Q96SL8 496 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 PLAAQ9Y263 795 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 PRAMEF18Q5VWM3 479 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 LRRC57Q8N9N7 239 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 TAAR1Q96RJ0 339 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 STK33Q9BYT3 514 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 GDF3Q9NR23 364 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 FEM1BQ9UK73 627 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 CNTNAP1P78357 1384 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 GOLGA8KD6RF30 607 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
SLX4-202ENST00000466154 RASA3Q14644 834 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 SLC15A2Q16348 729 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 XKR9Q5GH70 373 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 POP1Q99575 1024 aaKnown RBP17.74■□□□□ 0.43
SLX4-202ENST00000466154 TRIM51Q9BSJ1 452 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 STK32BQ9NY57 414 aa17.74■□□□□ 0.43
SLX4-202ENST00000466154 IRAK1P51617 712 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 SETQ01105 290 aaPredicted RBP17.73■□□□□ 0.43
SLX4-202ENST00000466154 ITGB3BPQ13352 177 aaPredicted RBP17.73■□□□□ 0.43
SLX4-202ENST00000466154 SPDYE2Q495Y8 402 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 PHLDB2Q86SQ0 1253 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 FAM160B2Q86V87 743 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 ARHGEF19Q8IW93 802 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 BORCS6Q96GS4 357 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.73■□□□□ 0.43
SLX4-202ENST00000466154 NR2E1Q9Y466 385 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 C10orf71Q711Q0 1435 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 GREB1LQ9C091 1923 aaPredicted RBP17.73■□□□□ 0.43
SLX4-202ENST00000466154 ZNF233A6NK53 670 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 EGFRP00533 1210 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 ASNSP08243 561 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 PRKCIP41743 596 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 ODF2Q5BJF6 829 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 PBKQ96KB5 322 aa17.73■□□□□ 0.43
SLX4-202ENST00000466154 CALCAP01258 141 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 DPEP1P16444 411 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 LMNB1P20700 586 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 GUCY1A3Q02108 690 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 PPP3CAQ08209 521 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 UGCGQ16739 394 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 SRLQ86TD4 932 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 QSER1Q2KHR3 1735 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 GOLGA6L10A6NI86 522 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 WNT10BO00744 389 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 P4HBP07237 508 aaKnown RBP17.72■□□□□ 0.43
SLX4-202ENST00000466154 VAMP7P51809 220 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 CETN1Q12798 172 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 ALS2CLQ60I27 953 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 TAF1DQ9H5J8 278 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms