RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 POLR3FQ9H1D9 316 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-206ENST00000465877 RGS18Q9NS28 235 aa14.35□□□□□ -0.11
COL5A1-206ENST00000465877 DDX19AQ9NUU7 478 aaKnown RBP14.35□□□□□ -0.11
COL5A1-206ENST00000465877 MTUS1Q9ULD2 1270 aa14.35□□□□□ -0.11
COL5A1-206ENST00000465877 EPOPA6NHQ4 379 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 C9IYK1 514 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 STAG3L1P0CL83 205 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 CDC25AP30304 524 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 PHKA2P46019 1235 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 CAPSQ13938 189 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 MXD4Q14582 209 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-206ENST00000465877 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 SLC24A5Q71RS6 500 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 CRIPAKQ8N1N5 446 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 MCPH1Q8NEM0 835 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 ASAP3Q8TDY4 903 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 TGS1Q96RS0 853 aaKnown RBP14.34□□□□□ -0.11
COL5A1-206ENST00000465877 MMTAG2Q9BU76 263 aaKnown RBP14.34□□□□□ -0.11
COL5A1-206ENST00000465877 INO80BQ9C086 356 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-206ENST00000465877 BHMT2Q9H2M3 363 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 GPRC5CQ9NQ84 441 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 LRFN2Q9ULH4 789 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
COL5A1-206ENST00000465877 PIN4Q9Y237 131 aaKnown RBP14.34□□□□□ -0.11
COL5A1-206ENST00000465877 ASAP2O43150 1006 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 DGKIO75912 1065 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 ZSCAN20P17040 1043 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-206ENST00000465877 GLRA2P23416 452 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 ARL2P36404 184 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 ERVK-21P61565 698 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 TFDP1Q14186 410 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 PADI6Q6TGC4 694 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 MAEAQ7L5Y9 396 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 CATSPER4Q7RTX7 472 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 GDPD5Q8WTR4 605 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-206ENST00000465877 AK8Q96MA6 479 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 C17orf80Q9BSJ5 609 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 ZSCAN16Q9H4T2 348 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-206ENST00000465877 MINDY3Q9H8M7 445 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 AGPAT5Q9NUQ2 364 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-206ENST00000465877 CLIC4Q9Y696 253 aa14.33□□□□□ -0.12
COL5A1-206ENST00000465877 PRRC2BQ5JSZ5 2229 aaKnown RBP14.32□□□□□ -0.12
COL5A1-206ENST00000465877 E9PMD0 336 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 GATMP50440 423 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 GRIN1Q05586 938 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-206ENST00000465877 ADGRE1Q14246 886 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 PTPAQ15257 358 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 ZRSR1Q15695 479 aaKnown RBP14.32□□□□□ -0.12
COL5A1-206ENST00000465877 PAN2Q504Q3 1202 aaKnown RBP14.32□□□□□ -0.12
COL5A1-206ENST00000465877 HYIQ5T013 277 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 KCNK18Q7Z418 384 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 SRGAP1Q7Z6B7 1085 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 CABP7Q86V35 215 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
COL5A1-206ENST00000465877 FIBCD1Q8N539 461 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 MAFAQ8NHW3 353 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-206ENST00000465877 CDK5RAP3Q96JB5 506 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 SAMD11Q96NU1 681 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 DACT1Q9NYF0 836 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 PCDHB7Q9Y5E2 793 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 VCANP13611 3396 aa14.32□□□□□ -0.12
COL5A1-206ENST00000465877 LRRIQ4A6NIV6 560 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 RFXAPO00287 272 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 ERLIN2O94905 339 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 EYA4O95677 639 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 LINC00271P0C7V0 271 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 CYP11B2P19099 503 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 LONP1P36776 959 aaKnown RBP14.31□□□□□ -0.12
COL5A1-206ENST00000465877 PTENP60484 403 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 MBTD1Q05BQ5 628 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 GRB10Q13322 594 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 TMEM119Q4V9L6 283 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 FAM102BQ5T8I3 360 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
COL5A1-206ENST00000465877 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-206ENST00000465877 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 FBXO22Q8NEZ5 403 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 PNMA5Q96PV4 448 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 USP28Q96RU2 1077 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 NFKBIZQ9BYH8 718 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 NT5C3AQ9H0P0 336 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 ELAC1Q9H777 363 aaKnown RBP14.31□□□□□ -0.12
COL5A1-206ENST00000465877 DNM3Q9UQ16 869 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 TCHHQ07283 1943 aa14.31□□□□□ -0.12
COL5A1-206ENST00000465877 ATF7P17544 494 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-206ENST00000465877 IGFBP4P22692 258 aa14.3□□□□□ -0.12
COL5A1-206ENST00000465877 CTNNB1P35222 781 aa14.3□□□□□ -0.12
COL5A1-206ENST00000465877 CEBPZQ03701 1054 aaKnown RBP14.3□□□□□ -0.12
COL5A1-206ENST00000465877 EPC2Q52LR7 807 aa14.3□□□□□ -0.12
COL5A1-206ENST00000465877 CDCA2Q69YH5 1023 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-206ENST00000465877 ECHDC2Q86YB7 292 aa14.3□□□□□ -0.12
COL5A1-206ENST00000465877 BSNDQ8WZ55 320 aa14.3□□□□□ -0.12
COL5A1-206ENST00000465877 CLP1Q92989 425 aaKnown RBP14.3□□□□□ -0.12
COL5A1-206ENST00000465877 RUSC1Q9BVN2 902 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms