RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 DAPK3O43293 454 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 PTX3P26022 381 aaPredicted RBP7.63□□□□□ -1.19
SMC4-205ENST00000465563 MAN2A2P49641 1150 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 ELAVL1Q15717 326 aaKnown RBP7.63□□□□□ -1.19
SMC4-205ENST00000465563 KRT40Q6A162 431 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 Q6ZRM9 215 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
SMC4-205ENST00000465563 CLIP3Q96DZ5 547 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 IL23AQ9NPF7 189 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 SLC2A4RGQ9NR83 387 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 RCAN3Q9UKA8 241 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 SYNPO2Q9UMS6 1093 aa7.63□□□□□ -1.19
SMC4-205ENST00000465563 A0A087X1B8 175 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 MAFGO15525 162 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 VSIG10L2P0DP72 767 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 INHBEP58166 350 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 ADCY1Q08828 1119 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 SQSTM1Q13501 440 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 BMS1Q14692 1282 aaKnown RBP7.62□□□□□ -1.19
SMC4-205ENST00000465563 MYBPC3Q14896 1274 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 SMN1Q16637 294 aaKnown RBP7.62□□□□□ -1.19
SMC4-205ENST00000465563 HAPLN2Q9GZV7 340 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 DNAI1Q9UI46 699 aa7.62□□□□□ -1.19
SMC4-205ENST00000465563 CBX4O00257 560 aa7.61□□□□□ -1.19
SMC4-205ENST00000465563 TOX4O94842 621 aa7.61□□□□□ -1.19
SMC4-205ENST00000465563 JUNP05412 331 aaKnown RBP7.61□□□□□ -1.19
SMC4-205ENST00000465563 JMJD7P0C870 316 aa7.61□□□□□ -1.19
SMC4-205ENST00000465563 SLC9A1P19634 815 aa7.61□□□□□ -1.19
SMC4-205ENST00000465563 FKBP15Q5T1M5 1219 aa7.61□□□□□ -1.19
SMC4-205ENST00000465563 TIGD7Q6NT04 549 aaPredicted RBP7.61□□□□□ -1.19
SMC4-205ENST00000465563 SMAD3P84022 425 aaKnown RBP7.6□□□□□ -1.19
SMC4-205ENST00000465563 ADCY2Q08462 1091 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 CFAP100Q494V2 611 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 CDCA2Q69YH5 1023 aaPredicted RBP7.6□□□□□ -1.19
SMC4-205ENST00000465563 MFSD5Q6N075 450 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 LDLRAD3Q86YD5 345 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 PHYKPLQ8IUZ5 450 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 C7orf31Q8N865 590 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 MRFAP1L1Q96HT8 127 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 ELF4Q99607 663 aaPredicted RBP7.6□□□□□ -1.19
SMC4-205ENST00000465563 GPR87Q9BY21 358 aa7.6□□□□□ -1.19
SMC4-205ENST00000465563 PPP1R12AO14974 1030 aaPredicted RBP7.59□□□□□ -1.19
SMC4-205ENST00000465563 SDSP20132 328 aa7.59□□□□□ -1.19
SMC4-205ENST00000465563 SLC25A3Q00325 362 aa7.59□□□□□ -1.19
SMC4-205ENST00000465563 KANSL1Q7Z3B3 1105 aa7.59□□□□□ -1.19
SMC4-205ENST00000465563 ARL8AQ96BM9 186 aa7.59□□□□□ -1.19
SMC4-205ENST00000465563 C14orf93Q9H972 538 aaKnown RBP7.59□□□□□ -1.19
SMC4-205ENST00000465563 SPO11Q9Y5K1 396 aa7.59□□□□□ -1.19
SMC4-205ENST00000465563 XDHP47989 1333 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 A0A0A6YYJ9 748 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 MFAP3LO75121 409 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 APOL3O95236 402 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 HNRNPLP14866 589 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMC4-205ENST00000465563 KIR2DL3P43628 341 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 TOB2Q14106 344 aaPredicted RBP7.58□□□□□ -1.2
SMC4-205ENST00000465563 ESRP1Q6NXG1 681 aaKnown RBP7.58□□□□□ -1.2
SMC4-205ENST00000465563 ZNF627Q7L945 461 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 MRGPRGQ86SM5 289 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 SH3TC2Q8TF17 1288 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 PRRX2Q99811 253 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 PITHD1Q9GZP4 211 aaPredicted RBP7.58□□□□□ -1.2
SMC4-205ENST00000465563 NCDNQ9UBB6 729 aa7.58□□□□□ -1.2
SMC4-205ENST00000465563 RFPL3O75679 317 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 PRPF6O94906 941 aaKnown RBP7.57□□□□□ -1.2
SMC4-205ENST00000465563 NPEPPSP55786 919 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 MAN2A1Q16706 1144 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 KIAA1841Q6NSI8 718 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 ELOA2Q8IYF1 753 aaPredicted RBP7.57□□□□□ -1.2
SMC4-205ENST00000465563 ZZZ3Q8IYH5 903 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 ULK2Q8IYT8 1036 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 CMTM4Q8IZR5 234 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 SREK1Q8WXA9 508 aaKnown RBP7.57□□□□□ -1.2
SMC4-205ENST00000465563 MYL10Q9BUA6 226 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 OSBPL6Q9BZF3 934 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 MTG2Q9H4K7 406 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 TOMM22Q9NS69 142 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 OXSMQ9NWU1 459 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 ZKSCAN5Q9Y2L8 839 aa7.57□□□□□ -1.2
SMC4-205ENST00000465563 GOLGA6L6A8MZA4 724 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 IPO13O94829 963 aaKnown RBP7.56□□□□□ -1.2
SMC4-205ENST00000465563 ASMTLO95671 621 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 RABGGTBP53611 331 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 CREB3L3Q68CJ9 461 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 ATXN2LQ8WWM7 1075 aaKnown RBP7.56□□□□□ -1.2
SMC4-205ENST00000465563 ZNF512Q96ME7 567 aaPredicted RBP7.56□□□□□ -1.2
SMC4-205ENST00000465563 MNTQ99583 582 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 POFUT1Q9H488 388 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 KANSL2Q9H9L4 492 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 GPRC5BQ9NZH0 403 aa7.56□□□□□ -1.2
SMC4-205ENST00000465563 MAGEC2Q9UBF1 373 aaPredicted RBP7.56□□□□□ -1.2
SMC4-205ENST00000465563 KLRG2A4D1S0 409 aaPredicted RBP7.55□□□□□ -1.2
SMC4-205ENST00000465563 OPHN1O60890 802 aa7.55□□□□□ -1.2
SMC4-205ENST00000465563 PABPC4Q13310 644 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMC4-205ENST00000465563 SPIDRQ14159 915 aa7.55□□□□□ -1.2
SMC4-205ENST00000465563 RTF1Q92541 710 aaKnown RBP7.55□□□□□ -1.2
SMC4-205ENST00000465563 UIMC1Q96RL1 719 aa7.55□□□□□ -1.2
SMC4-205ENST00000465563 ORAI3Q9BRQ5 295 aa7.55□□□□□ -1.2
SMC4-205ENST00000465563 NOL10Q9BSC4 688 aaKnown RBP7.55□□□□□ -1.2
SMC4-205ENST00000465563 ZSWIM4Q9H7M6 989 aa7.55□□□□□ -1.2
SMC4-205ENST00000465563 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms