RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 FAM20AQ96MK3 541 aa23.42■■□□□ 1.34
CSPG5-204ENST00000465441 KCNMB3Q9NPA1 279 aa23.42■■□□□ 1.34
CSPG5-204ENST00000465441 CHST12Q9NRB3 414 aa23.42■■□□□ 1.34
CSPG5-204ENST00000465441 DACT1Q9NYF0 836 aa23.42■■□□□ 1.34
CSPG5-204ENST00000465441 STK36Q9NRP7 1315 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 CTDNEP1O95476 244 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 ATF7P17544 494 aaPredicted RBP23.41■■□□□ 1.34
CSPG5-204ENST00000465441 XBP1P17861 261 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 PBX3P40426 434 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 PPP2R5CQ13362 524 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 PLPP4Q5VZY2 271 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 PLA2G4FQ68DD2 849 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 RHPN2Q8IUC4 686 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 RNF135Q8IUD6 432 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 KSR1Q8IVT5 923 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 LRRC43Q8N309 656 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 VN1R2Q8NFZ6 395 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 HELQQ8TDG4 1101 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 ZNF558Q96NG5 402 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 CDCA3Q99618 268 aaPredicted RBP23.41■■□□□ 1.34
CSPG5-204ENST00000465441 VAV3Q9UKW4 847 aa23.41■■□□□ 1.34
CSPG5-204ENST00000465441 CCNT1O60563 726 aaKnown RBP23.4■■□□□ 1.34
CSPG5-204ENST00000465441 NEFLP07196 543 aa23.4■■□□□ 1.34
CSPG5-204ENST00000465441 QARSP47897 775 aaKnown RBP23.4■■□□□ 1.34
CSPG5-204ENST00000465441 NPEPPSP55786 919 aa23.4■■□□□ 1.34
CSPG5-204ENST00000465441 PIK3AP1Q6ZUJ8 805 aa23.4■■□□□ 1.34
CSPG5-204ENST00000465441 HAS1Q92839 578 aa23.4■■□□□ 1.34
CSPG5-204ENST00000465441 TCF25Q9BQ70 676 aa23.4■■□□□ 1.34
CSPG5-204ENST00000465441 INO80BQ9C086 356 aaPredicted RBP23.4■■□□□ 1.34
CSPG5-204ENST00000465441 SPG21Q9NZD8 308 aa23.4■■□□□ 1.34
CSPG5-204ENST00000465441 P4HBP07237 508 aaKnown RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 AK2P54819 239 aa23.39■■□□□ 1.33
CSPG5-204ENST00000465441 KRT17Q04695 432 aa23.39■■□□□ 1.33
CSPG5-204ENST00000465441 KCNC3Q14003 757 aa23.39■■□□□ 1.33
CSPG5-204ENST00000465441 EARS2Q5JPH6 523 aaKnown RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 ZNF410Q86VK4 478 aa23.39■■□□□ 1.33
CSPG5-204ENST00000465441 ZNF579Q8NAF0 562 aaKnown RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 JPH2Q9BR39 696 aaPredicted RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 NGRNQ9NPE2 291 aaKnown RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 CYP26B1Q9NR63 512 aa23.39■■□□□ 1.33
CSPG5-204ENST00000465441 WRAP73Q9P2S5 460 aaPredicted RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 ORC3Q9UBD5 711 aaPredicted RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 MUTYHQ9UIF7 546 aa23.39■■□□□ 1.33
CSPG5-204ENST00000465441 USP15Q9Y4E8 981 aaPredicted RBP23.39■■□□□ 1.33
CSPG5-204ENST00000465441 HIDE1A8MVS5 230 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 DKC1O60832 514 aaKnown RBP eCLIP23.38■■□□□ 1.33
CSPG5-204ENST00000465441 FDPSP14324 419 aaKnown RBP23.38■■□□□ 1.33
CSPG5-204ENST00000465441 GCFC2P16383 781 aaKnown RBP23.38■■□□□ 1.33
CSPG5-204ENST00000465441 PHKA2P46019 1235 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 ANAPC15P60006 121 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 EPHA7Q15375 998 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 TMEM184AQ6ZMB5 413 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 TMC7Q7Z402 723 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 SLC39A11Q8N1S5 342 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 TRAIPQ9BWF2 469 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 ENTPD7Q9NQZ7 604 aa23.38■■□□□ 1.33
CSPG5-204ENST00000465441 NT5C1B-RDH14C9J2C7 533 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 TBX3O15119 743 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 MARCH6O60337 910 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 SFPQP23246 707 aaKnown RBP eCLIP23.37■■□□□ 1.33
CSPG5-204ENST00000465441 PPM1AP35813 382 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 ANKRD1Q15327 319 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 HERC4Q5GLZ8 1057 aaPredicted RBP23.37■■□□□ 1.33
CSPG5-204ENST00000465441 TWF2Q6IBS0 349 aaKnown RBP23.37■■□□□ 1.33
CSPG5-204ENST00000465441 NECAB1Q8N987 351 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 LPPQ93052 612 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 CEP170P1Q96L14 293 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 NLRP4Q96MN2 994 aa23.37■■□□□ 1.33
CSPG5-204ENST00000465441 NAP1L4Q99733 375 aaKnown RBP23.37■■□□□ 1.33
CSPG5-204ENST00000465441 FSD2A1L4K1 749 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 LOC730098B7Z3J9 87 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 BCAR1P56945 870 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 LONRF3Q496Y0 759 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 CATSPER4Q7RTX7 472 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 POTEDQ86YR6 584 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 C4orf19Q8IY42 314 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 S1PR5Q9H228 398 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 IFT122Q9HBG6 1241 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 RGL1Q9NZL6 768 aa23.36■■□□□ 1.33
CSPG5-204ENST00000465441 PIN4Q9Y237 131 aaKnown RBP23.36■■□□□ 1.33
CSPG5-204ENST00000465441 C5orf42Q9H799 3197 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 FAM205CA6NFA0 338 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 SKIP12755 728 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 TECP42680 631 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 ALDH7A1P49419 539 aaKnown RBP23.35■■□□□ 1.33
CSPG5-204ENST00000465441 NR5A1Q13285 461 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 ANKRD54Q6NXT1 300 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 SUSD6Q92537 303 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 WASF1Q92558 559 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 TMEM143Q96AN5 459 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 PHF7Q9BWX1 381 aaPredicted RBP23.35■■□□□ 1.33
CSPG5-204ENST00000465441 MRPL9Q9BYD2 267 aaKnown RBP23.35■■□□□ 1.33
CSPG5-204ENST00000465441 DHX33Q9H6R0 707 aaKnown RBP23.35■■□□□ 1.33
CSPG5-204ENST00000465441 FAM105AQ9NUU6 356 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 COL4A3BPQ9Y5P4 624 aa23.35■■□□□ 1.33
CSPG5-204ENST00000465441 MEIS3P2A8K0S8 358 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 ZNF623O75123 536 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 ME3Q16798 604 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 NCAPH2Q6IBW4 605 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms