RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 IFT74Q96LB3 600 aa18.78■□□□□ 0.6
USP39-211ENST00000465282 NLRP4Q96MN2 994 aa18.78■□□□□ 0.6
USP39-211ENST00000465282 FDXACB1Q9BRP7 624 aaPredicted RBP18.78■□□□□ 0.6
USP39-211ENST00000465282 IFT122Q9HBG6 1241 aa18.78■□□□□ 0.6
USP39-211ENST00000465282 ODF2LQ9ULJ1 636 aa18.78■□□□□ 0.6
USP39-211ENST00000465282 PADI3Q9ULW8 664 aa18.78■□□□□ 0.6
USP39-211ENST00000465282 COLQQ9Y215 455 aaPredicted RBP18.78■□□□□ 0.6
USP39-211ENST00000465282 SRGAP2CP0DJJ0 459 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.6
USP39-211ENST00000465282 GLRA2P23416 452 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 NAMPTP43490 491 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 PTENP60484 403 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 NAALADL2Q58DX5 795 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 SV2BQ7L1I2 683 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 OTOP2Q7RTS6 562 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 KSR1Q8IVT5 923 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 RNF149Q8NC42 400 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 TMEM40Q8WWA1 233 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 CHAMP1Q96JM3 812 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 RNPC3Q96LT9 517 aaKnown RBP18.77■□□□□ 0.6
USP39-211ENST00000465282 RUSC1Q9BVN2 902 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 LRRC27Q9C0I9 530 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 AGO3Q9H9G7 860 aaKnown RBP18.77■□□□□ 0.6
USP39-211ENST00000465282 MAGEF1Q9HAY2 307 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 ERVK-5Q9HDB9 667 aa18.77■□□□□ 0.6
USP39-211ENST00000465282 NOC2LQ9Y3T9 749 aaKnown RBP18.77■□□□□ 0.6
USP39-211ENST00000465282 FAM237AA0A1B0GTK4 181 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 CD52P31358 61 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 CAPSQ13938 189 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 MCM6Q14566 821 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 ARSHQ5FYA8 562 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 C9orf50Q5SZB4 431 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 MAEAQ7L5Y9 396 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 FAM228AQ86W67 206 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 GPBP1Q86WP2 473 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 PHOSPHO2Q8TCD6 241 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 PPP1R16BQ96T49 567 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 OSBPL7Q9BZF2 842 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 C2orf40Q9H1Z8 148 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 GPRC5CQ9NQ84 441 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 RNF216Q9NWF9 866 aaPredicted RBP18.76■□□□□ 0.59
USP39-211ENST00000465282 USP25Q9UHP3 1055 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 KCNH3Q9ULD8 1083 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 ST3GAL5Q9UNP4 418 aa18.76■□□□□ 0.59
USP39-211ENST00000465282 LAMA2P24043 3122 aaKnown RBP18.76■□□□□ 0.59
USP39-211ENST00000465282 PHLPP2Q6ZVD8 1323 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 A0A087X0B3 334 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 POLR2DO15514 142 aaKnown RBP18.75■□□□□ 0.59
USP39-211ENST00000465282 HIP1RO75146 1068 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 SCP2P22307 547 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 KCNJ6P48051 423 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 AMPD3Q01432 767 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 NFX1Q12986 1120 aaKnown RBP18.75■□□□□ 0.59
USP39-211ENST00000465282 E2F4Q16254 413 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 PDILTQ8N807 584 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 ASAP3Q8TDY4 903 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 LRRC15Q8TF66 581 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 PANK2Q9BZ23 570 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 TNMDQ9H2S6 317 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 CHST12Q9NRB3 414 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 LARSQ9P2J5 1176 aaKnown RBP18.75■□□□□ 0.59
USP39-211ENST00000465282 SLC4A7Q9Y6M7 1214 aa18.75■□□□□ 0.59
USP39-211ENST00000465282 EFNA5P52803 228 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 NCBP1Q09161 790 aaKnown RBP18.74■□□□□ 0.59
USP39-211ENST00000465282 DMP1Q13316 513 aaPredicted RBP18.74■□□□□ 0.59
USP39-211ENST00000465282 DHX8Q14562 1220 aaKnown RBP18.74■□□□□ 0.59
USP39-211ENST00000465282 LRIT3Q3SXY7 679 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 CDCA2Q69YH5 1023 aaPredicted RBP18.74■□□□□ 0.59
USP39-211ENST00000465282 ZBTB8OSQ8IWT0 167 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 DAW1Q8N136 415 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 SLC9A7Q96T83 725 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 NTPCRQ9BSD7 190 aaKnown RBP18.74■□□□□ 0.59
USP39-211ENST00000465282 GDPD2Q9HCC8 539 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 KBTBD4Q9NVX7 518 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 HPSEQ9Y251 543 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 TTC3P53804 2025 aa18.74■□□□□ 0.59
USP39-211ENST00000465282 LRRIQ4A6NIV6 560 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 ZBBXA8MT70 800 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 AMHP03971 560 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 KRT18P05783 430 aaKnown RBP18.73■□□□□ 0.59
USP39-211ENST00000465282 ZSCAN20P17040 1043 aaPredicted RBP18.73■□□□□ 0.59
USP39-211ENST00000465282 SMTNP53814 917 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 WDR5P61964 334 aaKnown RBP18.73■□□□□ 0.59
USP39-211ENST00000465282 MAPK7Q13164 816 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 DEPTORQ8TB45 409 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 SPIRE2Q8WWL2 714 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 MRPS27Q92552 414 aaKnown RBP18.73■□□□□ 0.59
USP39-211ENST00000465282 DHX58Q96C10 678 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 ZNF668Q96K58 619 aaPredicted RBP18.73■□□□□ 0.59
USP39-211ENST00000465282 TSPYL2Q9H2G4 693 aaPredicted RBP18.73■□□□□ 0.59
USP39-211ENST00000465282 C1orf112Q9NSG2 853 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 DACT1Q9NYF0 836 aa18.73■□□□□ 0.59
USP39-211ENST00000465282 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.72■□□□□ 0.59
USP39-211ENST00000465282 A0A1B0GVL5 298 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.72■□□□□ 0.59
USP39-211ENST00000465282 H0YCG3 227 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 ENPP3O14638 875 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 PLS3P13797 630 aa18.72■□□□□ 0.59
USP39-211ENST00000465282 PFKFB1P16118 471 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms