RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 DLG3Q92796 817 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 TTC1Q99614 292 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 NOP58Q9Y2X3 529 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 B3GALT1Q9Y5Z6 326 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 BRD4O60885 1362 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 CCDC88AQ3V6T2 1871 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 IRS2Q9Y4H2 1338 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 hCG_2014768A0A024R1R8 64 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 TEX51A0A1B0GUA7 166 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 PRAMEF25A6NGN4 478 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 HRKO00198 91 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 HIP1RO75146 1068 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 C4BPAP04003 597 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 PTX3P26022 381 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 IGBP1P78318 339 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 FAM50AQ14320 339 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 ZNF174Q15697 407 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 CR1LQ2VPA4 569 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 TEPPQ6URK8 271 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 SYDE1Q6ZW31 735 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 FAM126BQ8IXS8 530 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 KIAA1958Q8N8K9 716 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 FBXO15Q8NCQ5 510 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 WDR66Q8TBY9 1149 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 MZB1Q8WU39 189 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 ERCC4Q92889 916 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 DDX11Q96FC9 970 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 ELF4Q99607 663 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 IFT22Q9H7X7 185 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 GCM1Q9NP62 436 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 KCNH7Q9NS40 1196 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 DTLQ9NZJ0 730 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 CFDP1Q9UEE9 299 aaPredicted RBP6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 PCDHA5Q9Y5H7 936 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 PNPLA7Q6ZV29 1317 aa6.75□□□□□ -1.33
CACNA1C-223ENST00000465278 USP54Q70EL1 1684 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 ARHGEF10O15013 1369 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 BPIP17213 487 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 CDK11BP21127 795 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 FBLN1P23142 703 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 CDKN1CP49918 316 aaPredicted RBP6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 ANAPC15P60006 121 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 DLG4P78352 724 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 CACNB2Q08289 660 aaPredicted RBP6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 STAT4Q14765 748 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 TARBP2Q15633 366 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 CREB3L3Q68CJ9 461 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 MIB1Q86YT6 1006 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 IGDCC3Q8IVU1 814 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 PRPF38AQ8NAV1 312 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 TOMM22Q9NS69 142 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 WASF3Q9UPY6 502 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 FAN1Q9Y2M0 1017 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 RBBP6Q7Z6E9 1792 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 SPATA31E1Q6ZUB1 1445 aa6.74□□□□□ -1.33
CACNA1C-223ENST00000465278 METP08581 1390 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 RASSF10A6NK89 507 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 ETV2O00321 342 aaPredicted RBP6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 TGM5O43548 720 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 C8BP07358 591 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 CPEP16870 476 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 NKX3-2P78367 333 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 TMPRSS15P98073 1019 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 FOXO4P98177 505 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 PHF19Q5T6S3 580 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 TMC5Q6UXY8 1006 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 PCIF1Q9H4Z3 704 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 EMC7Q9NPA0 242 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 SLC52A1Q9NWF4 448 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 IFT172Q9UG01 1749 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 MUC3AQ02505 3323 aa6.73□□□□□ -1.33
CACNA1C-223ENST00000465278 LMO7Q8WWI1 1683 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 PRAMEF22A3QJZ6 481 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 N4BP3O15049 544 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 FOXP2O15409 715 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 ZEB2O60315 1214 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 MMEP08473 750 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 TMEM253P0C7T8 217 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 PFKLP17858 780 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 GJA4P35212 333 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 LIMS1P48059 325 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 LSSP48449 732 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 MESP2Q0VG99 397 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 CATSPEREQ5SY80 951 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 PRAMEF18Q5VWM3 479 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 C11orf74Q86VG3 221 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 ZC3H18Q86VM9 953 aaKnown RBP6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 TTLL11Q8NHH1 800 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 GBP4Q96PP9 640 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 MS4A5Q9H3V2 200 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 SLC39A2Q9NP94 309 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 UCKL1Q9NWZ5 548 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 MCM8Q9UJA3 840 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 RNF114Q9Y508 228 aa6.72□□□□□ -1.33
CACNA1C-223ENST00000465278 SPO11Q9Y5K1 396 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms