RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, human

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-208	ENST00000465245	SYNE3	Q6ZMZ3	975 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	OTOP3	Q7RTS5	596 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	TMEM173	Q86WV6	379 aa	Predicted RBP	13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	SIX5	Q8N196	739 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZNF710	Q8N1W2	664 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	LINC01465	Q8N7H1	131 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZNF713	Q8N859	430 aa	Predicted RBP	13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	DTWD2	Q8NBA8	298 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	FEZF2	Q8TBJ5	459 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	SLC22A17	Q8WUG5	538 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	NLRP7	Q8WX94	980 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	FAM167A	Q96KS9	214 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	GLT8D2	Q9H1C3	349 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	SFXN1	Q9H9B4	322 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	TBC1D22B	Q9NU19	505 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	RBM28	Q9NW13	759 aa	Known RBP	13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	GABBR1	Q9UBS5	961 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	DUSP12	Q9UNI6	340 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	SAMM50	Q9Y512	469 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	CARNS1	A5YM72	827 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	DARS	P14868	501 aa	Known RBP	13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	GPC3	P51654	580 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	SET	Q01105	290 aa	Predicted RBP	13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	JAKMIP3	Q5VZ66	844 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	GPR149	Q86SP6	731 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	DDX53	Q86TM3	631 aa	Known RBP	13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	SGMS1	Q86VZ5	419 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	PPFIBP1	Q86W92	1011 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	KCNG4	Q8TDN1	519 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	BARHL2	Q9NY43	387 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	PCDHA10	Q9Y5I2	948 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	FANCM	Q8IYD8	2048 aa		13.61	□□□□□ -0.23
TRA2B-208	ENST00000465245	STK25	O00506	426 aa		13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	SLC27A2	O14975	620 aa		13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	LMNA	P02545	664 aa	Known RBP	13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	APOA5	Q6Q788	366 aa		13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	EXOC6	Q8TAG9	804 aa		13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	RSPH1	Q8WYR4	309 aa		13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	IGSF21	Q96ID5	467 aa		13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	KCNK12	Q9HB15	430 aa		13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245		V9GY48	417 aa	Predicted RBP	13.6	□□□□□ -0.23
TRA2B-208	ENST00000465245	WDR64	B1ANS9	1081 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	CSDE1	O75534	798 aa	Known RBP	13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	OAT	P04181	439 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	CYP3A4	P08684	503 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	RFX1	P22670	979 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	PHKA2	P46019	1235 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	PRKCE	Q02156	737 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	RNASEL	Q05823	741 aa	Known RBP	13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	PTPN14	Q15678	1187 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	RTN1	Q16799	776 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	LONRF3	Q496Y0	759 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	CRYGN	Q8WXF5	182 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	LPP	Q93052	612 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	RMDN1	Q96DB5	314 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	INPP5F	Q9Y2H2	1132 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	DOCK8	Q8NF50	2099 aa		13.59	□□□□□ -0.23
TRA2B-208	ENST00000465245	CEP250	Q9BV73	2442 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	NARS	O43776	548 aa	Known RBP	13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	ZNF862	O60290	1169 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	GALT	P07902	379 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	KLRC2	P26717	231 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	CLCN4	P51793	760 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	TBC1D8B	Q0IIM8	1120 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	FUT2	Q10981	343 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	LETM2	Q2VYF4	491 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	NOMO2	Q5JPE7	1267 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	CREB3L3	Q68CJ9	461 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	TWF2	Q6IBS0	349 aa	Known RBP	13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	GLB1L	Q6UWU2	654 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	C15orf39	Q6ZRI6	1047 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	EMILIN2	Q9BXX0	1053 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	LSG1	Q9H089	658 aa	Known RBP	13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	GBP3	Q9H0R5	595 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	SEMA4A	Q9H3S1	761 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	NRDE2	Q9H7Z3	1164 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	CHST12	Q9NRB3	414 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	NRBP2	Q9NSY0	501 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	TBC1D13	Q9NVG8	400 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	IGSF9	Q9P2J2	1179 aa		13.58	□□□□□ -0.24
TRA2B-208	ENST00000465245	MIA3	Q5JRA6	1907 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	MED19	A0JLT2	244 aa	Predicted RBP	13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	ZBTB43	O43298	467 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	SSB	P05455	408 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	CFH	P08603	1231 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	SKI	P12755	728 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	SFPQ	P23246	707 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	SLC11A1	P49279	550 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	PRR16	Q569H4	304 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	DGLUCY	Q7Z3D6	616 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	KIAA2013	Q8IYS2	634 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	KLHL5	Q96PQ7	755 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	HINFP	Q9BQA5	517 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	VN1R3	Q9BXE9	311 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	DISC1	Q9NRI5	854 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	DNAJB4	Q9UDY4	337 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms