RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CYP2C9P11712 490 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 BMP6P22004 513 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 DNM2P50570 870 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 PTGISQ16647 500 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 KMT5BQ4FZB7 885 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 SLC39A5Q6ZMH5 540 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 CCDC65Q8IXS2 484 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 DRC7Q8IY82 874 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 SPC24Q8NBT2 197 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 TCP11Q8WWU5 503 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 POLR3FQ9H1D9 316 aaPredicted RBP18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 PARVGQ9HBI0 331 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 SUCLA2Q9P2R7 463 aaPredicted RBP18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 COL4A3BPQ9Y5P4 624 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 ARID2Q68CP9 1835 aa18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 TRIP12Q14669 1992 aaPredicted RBP18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 SMIM35A0A1B0GVV1 85 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 TMOD1P28289 359 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 ATN1P54259 1190 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 EHHADHQ08426 723 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 COASYQ13057 564 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 HERC4Q5GLZ8 1057 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 SERINC5Q86VE9 423 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 MYCT1Q8N699 235 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 ASAP3Q8TDY4 903 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 BSNDQ8WZ55 320 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 TRPV6Q9H1D0 765 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 C11orf49Q9H6J7 331 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 PLS3P13797 630 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 GAP43P17677 238 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 GLRA2P23416 452 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 RTP1P59025 263 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 KCNB1Q14721 858 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 PSPC1Q8WXF1 523 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 HPS3Q969F9 1004 aa18.67■□□□□ 0.58
EXOSC3-203ENST00000465229 EVPLQ92817 2033 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 B4GALT4O60513 344 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 RHOBTB3O94955 611 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 ERCC5P28715 1186 aaPredicted RBP18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 LAMTOR4Q0VGL1 99 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 ODR4Q5SWX8 454 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 ISM2Q6H9L7 571 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 TAF2Q6P1X5 1199 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 NECAB2Q7Z6G3 386 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 UBE2Q1Q7Z7E8 422 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 SFR1Q86XK3 245 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 KSR1Q8IVT5 923 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 ENOX1Q8TC92 643 aaKnown RBP18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 DNAJB3Q8WWF6 145 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 ABHD8Q96I13 439 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 FIZ1Q96SL8 496 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 FAM49AQ9H0Q0 323 aaPredicted RBP18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 HSD3B7Q9H2F3 369 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 C17orf75Q9HAS0 396 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 EXOC1Q9NV70 894 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 LARSQ9P2J5 1176 aaKnown RBP18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 AKT3Q9Y243 479 aa18.66■□□□□ 0.58
EXOSC3-203ENST00000465229 VTNP04004 478 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 PEX3P56589 373 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 MXD4Q14582 209 aaPredicted RBP18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 SNX17Q15036 470 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 C1orf53Q5VUE5 145 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 CCDC186Q7Z3E2 898 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 RHPN2Q8IUC4 686 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 WNT8BQ93098 351 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 MAP7D2Q96T17 732 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 NTPCRQ9BSD7 190 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 KCNF1Q9H3M0 494 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 TBC1D7Q9P0N9 293 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 IMPACTQ9P2X3 320 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 SEL1LQ9UBV2 794 aa18.65■□□□□ 0.58
EXOSC3-203ENST00000465229 ASAP2O43150 1006 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 OFD1O75665 1012 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 NPTX2P47972 431 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 STK4Q13043 487 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 PTK7Q13308 1070 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 FAM126BQ8IXS8 530 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 SPIRE2Q8WWL2 714 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 CCDC47Q96A33 483 aaKnown RBP18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 IFT74Q96LB3 600 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 OLFML3Q9NRN5 406 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 RMND1Q9NWS8 449 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 NOD1Q9Y239 953 aa18.64■□□□□ 0.57
EXOSC3-203ENST00000465229 CBFA2T2O43439 604 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 SRGAP2CP0DJJ0 459 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 PSMD2Q13200 908 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 DMP1Q13316 513 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 CAPSQ13938 189 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 FAM26FQ5R3K3 315 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 ANKRD33Q7Z3H0 272 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 FAM178BQ8IXR5 827 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 NME8Q8N427 588 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 DHX38Q92620 1227 aaKnown RBP18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 ZNF668Q96K58 619 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 ZNF830Q96NB3 372 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 FGFBP2Q9BYJ0 223 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 SLC39A2Q9NP94 309 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 CCDC169A6NNP5 214 aa18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 PQBP1O60828 265 aaKnown RBP18.63■□□□□ 0.57
EXOSC3-203ENST00000465229 CD4P01730 458 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms