RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 WDR81Q562E7 1941 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 PBX3P40426 434 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 TECP42680 631 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 NONOQ15233 471 aaKnown RBP eCLIP25.6■■□□□ 1.69
USP42-205ENST00000465073 NPY5RQ15761 445 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 ANKRD54Q6NXT1 300 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 TMC7Q7Z402 723 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 BMP8AQ7Z5Y6 402 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 HELQQ8TDG4 1101 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 RSPH1Q8WYR4 309 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 RPGRIP1Q96KN7 1286 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 INO80BQ9C086 356 aaPredicted RBP25.6■■□□□ 1.69
USP42-205ENST00000465073 S1PR5Q9H228 398 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 DDX11L8A8MPP1 907 aa25.59■■□□□ 1.69
USP42-205ENST00000465073 HIDE1A8MVS5 230 aa25.59■■□□□ 1.69
USP42-205ENST00000465073 CSDE1O75534 798 aaKnown RBP25.59■■□□□ 1.69
USP42-205ENST00000465073 HOXB8P17481 243 aaPredicted RBP25.59■■□□□ 1.69
USP42-205ENST00000465073 TRIM67Q6ZTA4 783 aa25.59■■□□□ 1.69
USP42-205ENST00000465073 KRT25Q7Z3Z0 450 aa25.59■■□□□ 1.69
USP42-205ENST00000465073 FBXL18Q96ME1 805 aa25.59■■□□□ 1.69
USP42-205ENST00000465073 LARP6Q9BRS8 491 aaKnown RBP25.59■■□□□ 1.69
USP42-205ENST00000465073 TRAIPQ9BWF2 469 aa25.59■■□□□ 1.69
USP42-205ENST00000465073 DDX25Q9UHL0 483 aaKnown RBP25.59■■□□□ 1.69
USP42-205ENST00000465073 TMEM150BA6NC51 233 aa25.58■■□□□ 1.69
USP42-205ENST00000465073 SFPQP23246 707 aaKnown RBP eCLIP25.58■■□□□ 1.69
USP42-205ENST00000465073 ALDH7A1P49419 539 aaKnown RBP25.58■■□□□ 1.69
USP42-205ENST00000465073 PSMC5P62195 406 aa25.58■■□□□ 1.69
USP42-205ENST00000465073 ZNF410Q86VK4 478 aa25.58■■□□□ 1.69
USP42-205ENST00000465073 SLC39A11Q8N1S5 342 aa25.58■■□□□ 1.69
USP42-205ENST00000465073 MRPL43Q8N983 215 aaKnown RBP25.58■■□□□ 1.69
USP42-205ENST00000465073 JPH2Q9BR39 696 aaPredicted RBP25.58■■□□□ 1.69
USP42-205ENST00000465073 SUCLA2Q9P2R7 463 aaPredicted RBP25.58■■□□□ 1.69
USP42-205ENST00000465073 A0A087WZ62 844 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 TECTAO75443 2155 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 MAFO75444 373 aaPredicted RBP25.57■■□□□ 1.68
USP42-205ENST00000465073 SKIP12755 728 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 ZXDAP98168 799 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 STK3Q13188 491 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 SMC1AQ14683 1233 aaKnown RBP25.57■■□□□ 1.68
USP42-205ENST00000465073 SYCE2Q6PIF2 218 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 AIFM3Q96NN9 605 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 SH2D3AQ9BRG2 576 aa25.57■■□□□ 1.68
USP42-205ENST00000465073 FDXACB1Q9BRP7 624 aaPredicted RBP25.57■■□□□ 1.68
USP42-205ENST00000465073 TMEM221A6NGB7 291 aa25.56■■□□□ 1.68
USP42-205ENST00000465073 M0R296 226 aa25.56■■□□□ 1.68
USP42-205ENST00000465073 PHKA2P46019 1235 aa25.56■■□□□ 1.68
USP42-205ENST00000465073 BMS1Q14692 1282 aaKnown RBP25.56■■□□□ 1.68
USP42-205ENST00000465073 INF2Q27J81 1249 aa25.56■■□□□ 1.68
USP42-205ENST00000465073 LLGL2Q6P1M3 1020 aa25.56■■□□□ 1.68
USP42-205ENST00000465073 FAM20AQ96MK3 541 aa25.56■■□□□ 1.68
USP42-205ENST00000465073 PDRG1Q9NUG6 133 aa25.56■■□□□ 1.68
USP42-205ENST00000465073 CARNS1A5YM72 827 aa25.55■■□□□ 1.68
USP42-205ENST00000465073 BCAR1P56945 870 aa25.55■■□□□ 1.68
USP42-205ENST00000465073 NHLH1Q02575 133 aa25.55■■□□□ 1.68
USP42-205ENST00000465073 TWF2Q6IBS0 349 aaKnown RBP25.55■■□□□ 1.68
USP42-205ENST00000465073 ANO5Q75V66 913 aa25.55■■□□□ 1.68
USP42-205ENST00000465073 RHPN2Q8IUC4 686 aa25.55■■□□□ 1.68
USP42-205ENST00000465073 CASP10Q92851 521 aa25.55■■□□□ 1.68
USP42-205ENST00000465073 C2orf71A6NGG8 1288 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 CDKL5O76039 1030 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 PPP2R5CQ13362 524 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 LETM2Q2VYF4 491 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 TPRNQ4KMQ1 711 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 ALYREFQ86V81 257 aaKnown RBP25.54■■□□□ 1.68
USP42-205ENST00000465073 PBXIP1Q96AQ6 731 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 KCNJ14Q9UNX9 436 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 ZNF318Q5VUA4 2279 aa25.54■■□□□ 1.68
USP42-205ENST00000465073 CCDC194A0A1B0GVG4 234 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 SLC37A4O43826 429 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 DKC1O60832 514 aaKnown RBP eCLIP25.53■■□□□ 1.68
USP42-205ENST00000465073 GCFC2P16383 781 aaKnown RBP25.53■■□□□ 1.68
USP42-205ENST00000465073 QARSP47897 775 aaKnown RBP25.53■■□□□ 1.68
USP42-205ENST00000465073 EXOC8Q8IYI6 725 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 TMEM169Q96HH4 297 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 PHF20Q9BVI0 1012 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 CYP26B1Q9NR63 512 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 PIN4Q9Y237 131 aaKnown RBP25.53■■□□□ 1.68
USP42-205ENST00000465073 EML1O00423 815 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 ZNF623O75123 536 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 RAB27AP51159 221 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 PPP4R3AQ6IN85 833 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 GLB1LQ6UWU2 654 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 CATSPER4Q7RTX7 472 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 NEK8Q86SG6 692 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 APOL5Q9BWW9 433 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 KCNMB3Q9NPA1 279 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 VAV3Q9UKW4 847 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 PPME1Q9Y570 386 aa25.53■■□□□ 1.68
USP42-205ENST00000465073 NT5C1B-RDH14C9J2C7 533 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 CXCL14O95715 111 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 XBP1P17861 261 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 PLA2G4FQ68DD2 849 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 KSR1Q8IVT5 923 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 SLC7A3Q8WY07 619 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 NLRP4Q96MN2 994 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 SLKQ9H2G2 1235 aaPredicted RBP25.52■■□□□ 1.68
USP42-205ENST00000465073 FAM105AQ9NUU6 356 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 HCFC2Q9Y5Z7 792 aa25.52■■□□□ 1.68
USP42-205ENST00000465073 ZC3H11AO75152 810 aaKnown RBP eCLIP25.51■■□□□ 1.67
USP42-205ENST00000465073 P4HBP07237 508 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms