RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 DHX33Q9H6R0 707 aaKnown RBP28.93■■■□□ 2.22
U2AF1-206ENST00000464750 BMP2KQ9NSY1 1161 aaPredicted RBP28.93■■■□□ 2.22
U2AF1-206ENST00000464750 DACT1Q9NYF0 836 aa28.93■■■□□ 2.22
U2AF1-206ENST00000464750 PCDHA12Q9UN75 941 aa28.93■■■□□ 2.22
U2AF1-206ENST00000464750 OTUD6AQ7L8S5 288 aa28.92■■■□□ 2.22
U2AF1-206ENST00000464750 EXOC8Q8IYI6 725 aa28.92■■■□□ 2.22
U2AF1-206ENST00000464750 ABI1Q8IZP0 508 aa28.92■■■□□ 2.22
U2AF1-206ENST00000464750 ZSCAN31Q96LW9 406 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-206ENST00000464750 INO80BQ9C086 356 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-206ENST00000464750 CWH43Q9H720 699 aa28.92■■■□□ 2.22
U2AF1-206ENST00000464750 TTC12Q9H892 705 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-206ENST00000464750 COL4A3BPQ9Y5P4 624 aa28.92■■■□□ 2.22
U2AF1-206ENST00000464750 A0A0U1RQF3 1178 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 NCK2O43639 380 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 IRS1P35568 1242 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 XKR9Q5GH70 373 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 PTCRAQ6ISU1 281 aaPredicted RBP28.91■■■□□ 2.22
U2AF1-206ENST00000464750 TPH2Q8IWU9 490 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 COLGALT1Q8NBJ5 622 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 TMEM143Q96AN5 459 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 CASD1Q96PB1 797 aa28.91■■■□□ 2.22
U2AF1-206ENST00000464750 EIF2AK1Q9BQI3 630 aaKnown RBP28.91■■■□□ 2.22
U2AF1-206ENST00000464750 SH2B1Q9NRF2 756 aaPredicted RBP28.91■■■□□ 2.22
U2AF1-206ENST00000464750 IL9P15248 144 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 LAG3P18627 525 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 ATP2B1P20020 1258 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 TXKP42681 527 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 EMC2Q15006 297 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 ZNF598Q86UK7 904 aaKnown RBP28.9■■■□□ 2.22
U2AF1-206ENST00000464750 THNSL1Q8IYQ7 743 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 LRRC43Q8N309 656 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 PSPC1Q8WXF1 523 aaKnown RBP28.9■■■□□ 2.22
U2AF1-206ENST00000464750 CHST12Q9NRB3 414 aa28.9■■■□□ 2.22
U2AF1-206ENST00000464750 PIN4Q9Y237 131 aaKnown RBP28.9■■■□□ 2.22
U2AF1-206ENST00000464750 ZBTB39O15060 712 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 SLITRK3O94933 977 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 ATF7P17544 494 aaPredicted RBP28.89■■■□□ 2.22
U2AF1-206ENST00000464750 GTF2F1P35269 517 aaKnown RBP eCLIP28.89■■■□□ 2.22
U2AF1-206ENST00000464750 HMGN5P82970 282 aaKnown RBP28.89■■■□□ 2.22
U2AF1-206ENST00000464750 CSPP1Q1MSJ5 1256 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 CLLU1OSQ5K130 101 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 CATSPER4Q7RTX7 472 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 PPP2R3CQ969Q6 453 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 MTMR9Q96QG7 549 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 IGFLR1Q9H665 355 aa28.89■■■□□ 2.22
U2AF1-206ENST00000464750 GAS2O43903 313 aaKnown RBP28.88■■■□□ 2.21
U2AF1-206ENST00000464750 FGF18O76093 207 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 EOMESO95936 686 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 MCM7P33993 719 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 RBM25P49756 843 aaKnown RBP28.88■■■□□ 2.21
U2AF1-206ENST00000464750 UBE3AQ05086 875 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 CTC1Q2NKJ3 1217 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 PUS10Q3MIT2 529 aaKnown RBP28.88■■■□□ 2.21
U2AF1-206ENST00000464750 TWF2Q6IBS0 349 aaKnown RBP28.88■■■□□ 2.21
U2AF1-206ENST00000464750 LRRC55Q6ZSA7 311 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 ADGRD2Q7Z7M1 963 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 FAM184AQ8NB25 1140 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 PRPF31Q8WWY3 499 aaKnown RBP28.88■■■□□ 2.21
U2AF1-206ENST00000464750 TMEM60Q9H2L4 133 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 IFT122Q9HBG6 1241 aa28.88■■■□□ 2.21
U2AF1-206ENST00000464750 LTBRP36941 435 aa28.87■■■□□ 2.21
U2AF1-206ENST00000464750 HELQQ8TDG4 1101 aa28.87■■■□□ 2.21
U2AF1-206ENST00000464750 TCP11Q8WWU5 503 aa28.87■■■□□ 2.21
U2AF1-206ENST00000464750 MTRQ99707 1265 aa28.87■■■□□ 2.21
U2AF1-206ENST00000464750 HSD17B14Q9BPX1 270 aa28.87■■■□□ 2.21
U2AF1-206ENST00000464750 PCDHGC5Q9Y5F6 944 aa28.87■■■□□ 2.21
U2AF1-206ENST00000464750 GRXCR2A6NFK2 248 aa28.86■■■□□ 2.21
U2AF1-206ENST00000464750 POTEMA6NI47 508 aa28.86■■■□□ 2.21
U2AF1-206ENST00000464750 LYPLA2O95372 231 aa28.86■■■□□ 2.21
U2AF1-206ENST00000464750 PHKA2P46019 1235 aa28.86■■■□□ 2.21
U2AF1-206ENST00000464750 LAMTOR4Q0VGL1 99 aa28.86■■■□□ 2.21
U2AF1-206ENST00000464750 TRAIPQ9BWF2 469 aa28.86■■■□□ 2.21
U2AF1-206ENST00000464750 FOXP1Q9H334 677 aaPredicted RBP28.86■■■□□ 2.21
U2AF1-206ENST00000464750 TLR9Q9NR96 1032 aa28.86■■■□□ 2.21
U2AF1-206ENST00000464750 LINC01565O15544 149 aa28.85■■■□□ 2.21
U2AF1-206ENST00000464750 SRGAP2CP0DJJ0 459 aa28.85■■■□□ 2.21
U2AF1-206ENST00000464750 DLX2Q07687 328 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-206ENST00000464750 FBXO18Q8NFZ0 1043 aa28.85■■■□□ 2.21
U2AF1-206ENST00000464750 CCDC43Q96MW1 224 aaKnown RBP28.85■■■□□ 2.21
U2AF1-206ENST00000464750 XPNPEP1Q9NQW7 623 aa28.85■■■□□ 2.21
U2AF1-206ENST00000464750 AGPAT5Q9NUQ2 364 aa28.85■■■□□ 2.21
U2AF1-206ENST00000464750 TBX10O75333 385 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 KCNT2Q6UVM3 1135 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 SRGAP1Q7Z6B7 1085 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 FERMT3Q86UX7 667 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 FAM178BQ8IXR5 827 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 ZNF558Q96NG5 402 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 MRPL9Q9BYD2 267 aaKnown RBP28.84■■■□□ 2.21
U2AF1-206ENST00000464750 ANKEF1Q9NU02 776 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 FAM105AQ9NUU6 356 aa28.84■■■□□ 2.21
U2AF1-206ENST00000464750 SKIP12755 728 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 PBX3P40426 434 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 NRIP1P48552 1158 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 RAB27AP51159 221 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 GNL2Q13823 731 aaKnown RBP28.83■■■□□ 2.21
U2AF1-206ENST00000464750 RABEP1Q15276 862 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 CLUL1Q15846 466 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 RNF149Q8NC42 400 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 MICAL1Q8TDZ2 1067 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 MINDY3Q9H8M7 445 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms