RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SLC35G2Q8TBE7 412 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 FBXO25Q8TCJ0 367 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 AGAP11Q8TF27 550 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 CTNNBL1Q8WYA6 563 aaPredicted RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 TBC1D31Q96DN5 1066 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 MBOAT7Q96N66 472 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 PRMT1Q99873 361 aaKnown RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 GLT8D2Q9H1C3 349 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 ERVK-5Q9HDB9 667 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 HOMER3Q9NSC5 361 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 ABCF3Q9NUQ8 709 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 AGAP1Q9UPQ3 857 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 USP15Q9Y4E8 981 aaPredicted RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 STK24Q9Y6E0 443 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 SPATA31A1Q5TZJ5 1347 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 CYP3A7-CYP3A51PA0A087WV96 503 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 RIPK2O43353 540 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 EVI5O60447 810 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SUN1O94901 812 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 UBOX5O94941 541 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 GJB6O95452 261 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 RPSAP08865 295 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 RARGP13631 454 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 PLCG2P16885 1265 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 CYP3A7P24462 503 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 CTNNA2P26232 953 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 HOXD13P35453 343 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 CASP5P51878 434 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 CCNG1P51959 295 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 GRIK3Q13003 919 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 AUHQ13825 339 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 SLC29A2Q14542 456 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 UBE2SQ16763 222 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 FAM133BQ5BKY9 247 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 DCAF17Q5H9S7 520 aaPredicted RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 MOXD1Q6UVY6 613 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 TXNRD3Q86VQ6 643 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SFR1Q86XK3 245 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SLFN12Q8IYM2 578 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 TBC1D16Q8TBP0 767 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 FAM212AQ96EL1 285 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 BORCS6Q96GS4 357 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 IFT74Q96LB3 600 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 STK33Q9BYT3 514 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 NYXQ9GZU5 481 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 ECT2Q9H8V3 914 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 OSGEPQ9NPF4 335 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SNX24Q9Y343 169 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 ASTN1O14525 1302 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 PFASO15067 1338 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 FRMPD4Q14CM0 1322 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 FRMPD2Q68DX3 1309 aaPredicted RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 IGSF9BQ9UPX0 1349 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 GPR75-ASB3A0A0A6YYF3 556 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 IGKV6D-41A0A0C4DH26 115 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 TLDC2A0PJX2 215 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 RASGRF2O14827 1237 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 MED24O75448 989 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SKIV2L2P42285 1042 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 ALDH5A1P51649 535 aaPredicted RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 COPS2P61201 443 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 ICA1Q05084 483 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 MKRN3Q13064 507 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 PPP2R5AQ15172 486 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 DIXDC1Q155Q3 683 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 CYP1B1Q16678 543 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 ZNF568Q3ZCX4 644 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 TRMT10CQ7L0Y3 403 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 BZW1Q7L1Q6 419 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 CYFIP1Q7L576 1253 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 RHOT2Q8IXI1 618 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 CEP120Q8N960 986 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SYT2Q8N9I0 419 aaPredicted RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 ERMNQ8TAM6 284 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 EPS8L3Q8TE67 593 aaKnown RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 GLG1Q92896 1179 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 ACSBG1Q96GR2 724 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 NLRP3Q96P20 1036 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 CDCA7Q9BWT1 371 aaPredicted RBP7.88□□□□□ -1.15
USP48-206ENST00000464577 TAOK3Q9H2K8 898 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 JMJD4Q9H9V9 463 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 ARHGEF3Q9NR81 526 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SLC5A4Q9NY91 659 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 SLAIN2Q9P270 581 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 JAG2Q9Y219 1238 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 PCDHA3Q9Y5H8 950 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 MYO3BQ8WXR4 1341 aa7.88□□□□□ -1.15
USP48-206ENST00000464577 ANKRD62A6NC57 917 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 IGF2BP3O00425 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
USP48-206ENST00000464577 PPP1R11O60927 126 aaPredicted RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 LUC7L3O95232 432 aaKnown RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 RFX1P22670 979 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ATP5DP30049 168 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 BTDP43251 543 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 RPL21P46778 160 aaKnown RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 KCNJ2P63252 427 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ZNF543Q08ER8 600 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 PRPF4BQ13523 1007 aaKnown RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 C11orf91Q3C1V1 193 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms