RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 USP49Q70CQ1 688 aa19.58■□□□□ 0.72
UFM1-204ENST00000464423 CABP7Q86V35 215 aa19.58■□□□□ 0.72
UFM1-204ENST00000464423 CRIPAKQ8N1N5 446 aa19.58■□□□□ 0.72
UFM1-204ENST00000464423 LRRC15Q8TF66 581 aa19.58■□□□□ 0.72
UFM1-204ENST00000464423 CDX2Q99626 313 aaPredicted RBP19.58■□□□□ 0.72
UFM1-204ENST00000464423 CSRNP2Q9H175 543 aa19.58■□□□□ 0.72
UFM1-204ENST00000464423 RGS18Q9NS28 235 aa19.58■□□□□ 0.72
UFM1-204ENST00000464423 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.72
UFM1-204ENST00000464423 ZDHHC9Q9Y397 364 aa19.58■□□□□ 0.72
UFM1-204ENST00000464423 TMEM265A0A087WTH1 108 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 EYA4O95677 639 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 CYP11B2P19099 503 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 LONP1P36776 959 aaKnown RBP19.57■□□□□ 0.72
UFM1-204ENST00000464423 GATMP50440 423 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 TMEM119Q4V9L6 283 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 ODR4Q5SWX8 454 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 FAM102BQ5T8I3 360 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 BSNDQ8WZ55 320 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 YME1L1Q96TA2 773 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 PRDM12Q9H4Q4 367 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 DNM3Q9UQ16 869 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 INSL6Q9Y581 213 aa19.57■□□□□ 0.72
UFM1-204ENST00000464423 EPOPA6NHQ4 379 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 C9IYK1 514 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 ASAP2O43150 1006 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 SARSP49591 514 aaKnown RBP19.56■□□□□ 0.72
UFM1-204ENST00000464423 SLC39A14Q15043 492 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 MCPH1Q8NEM0 835 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 MYLIPQ8WY64 445 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 EPSTI1Q96J88 318 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 CHAMP1Q96JM3 812 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 AK8Q96MA6 479 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 RUSC1Q9BVN2 902 aa19.56■□□□□ 0.72
UFM1-204ENST00000464423 SRPRBQ9Y5M8 271 aaKnown RBP19.56■□□□□ 0.72
UFM1-204ENST00000464423 LINC01553A4QN01 128 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 RFXAPO00287 272 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 SLC34A2O95436 690 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 UBA7P41226 1012 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 NASPP49321 788 aaPredicted RBP19.55■□□□□ 0.72
UFM1-204ENST00000464423 MXD4Q14582 209 aaPredicted RBP19.55■□□□□ 0.72
UFM1-204ENST00000464423 KARSQ15046 597 aaKnown RBP19.55■□□□□ 0.72
UFM1-204ENST00000464423 SLC24A5Q71RS6 500 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 CATSPER4Q7RTX7 472 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 NPAS4Q8IUM7 802 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 LINC00301Q8NCQ3 95 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 SP7Q8TDD2 431 aaPredicted RBP19.55■□□□□ 0.72
UFM1-204ENST00000464423 RC3H2Q9HBD1 1191 aaKnown RBP19.55■□□□□ 0.72
UFM1-204ENST00000464423 MTUS1Q9ULD2 1270 aa19.55■□□□□ 0.72
UFM1-204ENST00000464423 DGKIO75912 1065 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 SSBP05455 408 aaKnown RBP eCLIP19.54■□□□□ 0.72
UFM1-204ENST00000464423 SFPQP23246 707 aaKnown RBP eCLIP19.54■□□□□ 0.72
UFM1-204ENST00000464423 PHKA2P46019 1235 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 PTENP60484 403 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 BECN1Q14457 450 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 RINT1Q6NUQ1 792 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 SRGAP1Q7Z6B7 1085 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 ARNTL2Q8WYA1 636 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 ZNF689Q96CS4 500 aaPredicted RBP19.54■□□□□ 0.72
UFM1-204ENST00000464423 CDK5RAP3Q96JB5 506 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 ZNF396Q96N95 335 aaPredicted RBP19.54■□□□□ 0.72
UFM1-204ENST00000464423 INO80BQ9C086 356 aaPredicted RBP19.54■□□□□ 0.72
UFM1-204ENST00000464423 C1orf112Q9NSG2 853 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 PIN4Q9Y237 131 aaKnown RBP19.54■□□□□ 0.72
UFM1-204ENST00000464423 COL4A6Q14031 1691 aa19.54■□□□□ 0.72
UFM1-204ENST00000464423 LRRIQ4A6NIV6 560 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 FGFR1P11362 822 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
UFM1-204ENST00000464423 ZSCAN20P17040 1043 aaPredicted RBP19.53■□□□□ 0.72
UFM1-204ENST00000464423 PLCG1P19174 1290 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 FAM189BP81408 668 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 MBTD1Q05BQ5 628 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 RAD51AP2Q09MP3 1159 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 TFDP1Q14186 410 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 STK38Q15208 465 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 PAN2Q504Q3 1202 aaKnown RBP19.53■□□□□ 0.72
UFM1-204ENST00000464423 C1orf186Q6ZWK4 172 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 DAW1Q8N136 415 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 SYMPKQ92797 1274 aaKnown RBP19.53■□□□□ 0.72
UFM1-204ENST00000464423 C17orf80Q9BSJ5 609 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 NT5C3AQ9H0P0 336 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 LRFN2Q9ULH4 789 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 PCDHB7Q9Y5E2 793 aa19.53■□□□□ 0.72
UFM1-204ENST00000464423 NPHP3-ACAD11A0A0J9YXS1 232 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 INO80B-WBP1J3KQ70 363 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 HIP1RO75146 1068 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 BRD1O95696 1058 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 PLA2G4BP0C869 781 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 HOXA11P31270 313 aaPredicted RBP19.52■□□□□ 0.72
UFM1-204ENST00000464423 SLC12A3P55017 1021 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 DNM1Q05193 864 aaKnown RBP19.52■□□□□ 0.72
UFM1-204ENST00000464423 MAPK7Q13164 816 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 ADGRE1Q14246 886 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 DHX8Q14562 1220 aaKnown RBP19.52■□□□□ 0.72
UFM1-204ENST00000464423 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 ECHDC2Q86YB7 292 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 SYT2Q8N9I0 419 aaPredicted RBP19.52■□□□□ 0.72
UFM1-204ENST00000464423 KRI1Q8N9T8 703 aaKnown RBP19.52■□□□□ 0.72
UFM1-204ENST00000464423 RNF169Q8NCN4 708 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 CALML4Q96GE6 196 aa19.52■□□□□ 0.72
UFM1-204ENST00000464423 KIFC3Q9BVG8 833 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms